RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 PMS2CLQ68D20 193 aa17.72■□□□□ 0.43
LTBP3-208ENST00000527339 SLC36A4Q6YBV0 504 aa17.72■□□□□ 0.43
LTBP3-208ENST00000527339 ATP11CQ8NB49 1132 aa17.72■□□□□ 0.43
LTBP3-208ENST00000527339 BAG1Q99933 345 aaPredicted RBP17.72■□□□□ 0.43
LTBP3-208ENST00000527339 NOL6Q9H6R4 1146 aaKnown RBP17.72■□□□□ 0.43
LTBP3-208ENST00000527339 CWC15Q9P013 229 aaKnown RBP17.72■□□□□ 0.43
LTBP3-208ENST00000527339 MBD1Q9UIS9 605 aaPredicted RBP17.72■□□□□ 0.43
LTBP3-208ENST00000527339 SCML1Q9UN30 329 aa17.72■□□□□ 0.43
LTBP3-208ENST00000527339 CYP8B1Q9UNU6 501 aa17.72■□□□□ 0.43
LTBP3-208ENST00000527339 PCDHA13Q9Y5I0 950 aa17.72■□□□□ 0.43
LTBP3-208ENST00000527339 EPN1Q9Y6I3 576 aaPredicted RBP17.72■□□□□ 0.43
LTBP3-208ENST00000527339 H3BRJ5 948 aa17.71■□□□□ 0.43
LTBP3-208ENST00000527339 MAP3K13O43283 966 aa17.71■□□□□ 0.43
LTBP3-208ENST00000527339 IGLV3-19P01714 112 aa17.71■□□□□ 0.43
LTBP3-208ENST00000527339 ERCC2P18074 760 aa17.71■□□□□ 0.43
LTBP3-208ENST00000527339 NOVA1P51513 510 aaKnown RBP17.71■□□□□ 0.43
LTBP3-208ENST00000527339 TPMTP51580 245 aa17.71■□□□□ 0.43
LTBP3-208ENST00000527339 ARF5P84085 180 aa17.71■□□□□ 0.43
LTBP3-208ENST00000527339 DPYSQ14117 519 aa17.71■□□□□ 0.43
LTBP3-208ENST00000527339 ELAVL3Q14576 367 aaKnown RBP17.71■□□□□ 0.43
LTBP3-208ENST00000527339 MESDQ14696 234 aa17.71■□□□□ 0.43
LTBP3-208ENST00000527339 TTC31Q49AM3 519 aaPredicted RBP17.71■□□□□ 0.43
LTBP3-208ENST00000527339 SPDYCQ5MJ68 293 aa17.71■□□□□ 0.43
LTBP3-208ENST00000527339 TXNRD3NBQ6F5E7 133 aa17.71■□□□□ 0.43
LTBP3-208ENST00000527339 LINGO4Q6UY18 593 aa17.71■□□□□ 0.43
LTBP3-208ENST00000527339 CACUL1Q86Y37 369 aa17.71■□□□□ 0.43
LTBP3-208ENST00000527339 FRMD1Q8N878 549 aa17.71■□□□□ 0.43
LTBP3-208ENST00000527339 CCDC114Q96M63 670 aa17.71■□□□□ 0.43
LTBP3-208ENST00000527339 CD93Q9NPY3 652 aa17.71■□□□□ 0.43
LTBP3-208ENST00000527339 FASNP49327 2511 aaKnown RBP17.7■□□□□ 0.42
LTBP3-208ENST00000527339 ZSCAN5CA6NGD5 496 aaPredicted RBP17.7■□□□□ 0.42
LTBP3-208ENST00000527339 PCNX2A6NKB5 2137 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 RASA4BC9J798 803 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 ALOX15BO15296 676 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 RASA4O43374 803 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 KDELR3O43731 214 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 KRT7P08729 469 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 HOXB3P14651 431 aaPredicted RBP17.7■□□□□ 0.42
LTBP3-208ENST00000527339 VAV1P15498 845 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 CD6P30203 668 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 OXTRP30559 389 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 SERPINH1P50454 418 aaKnown RBP17.7■□□□□ 0.42
LTBP3-208ENST00000527339 NDST2P52849 883 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 HADHBP55084 474 aaKnown RBP17.7■□□□□ 0.42
LTBP3-208ENST00000527339 C22orf39Q6P5X5 142 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 Q6ZVU0 165 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 LPCAT2Q7L5N7 544 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 POLNQ7Z5Q5 900 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 ZNF354CQ86Y25 554 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 CPNE8Q86YQ8 564 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 TMEM139Q8IV31 216 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 STK40Q8N2I9 435 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 FAM71BQ8TC56 605 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 OR8D1Q8WZ84 308 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 FAM129BQ96TA1 746 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 CEP44Q9C0F1 390 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 LRRC19Q9H756 370 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 PCDH18Q9HCL0 1135 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 RCOR3Q9P2K3 495 aaPredicted RBP17.7■□□□□ 0.42
LTBP3-208ENST00000527339 ZMIZ1Q9ULJ6 1067 aa17.7■□□□□ 0.42
LTBP3-208ENST00000527339 NUMA1Q14980 2115 aa17.69■□□□□ 0.42
LTBP3-208ENST00000527339 A0A0A6YYK5 440 aaPredicted RBP17.69■□□□□ 0.42
LTBP3-208ENST00000527339 TMEM110-MUSTN1A8MSY1 372 aa17.69■□□□□ 0.42
LTBP3-208ENST00000527339 K7ERQ8 282 aa17.69■□□□□ 0.42
LTBP3-208ENST00000527339 MCF2LO15068 1137 aa17.69■□□□□ 0.42
LTBP3-208ENST00000527339 SMAD6O43541 496 aaKnown RBP17.69■□□□□ 0.42
LTBP3-208ENST00000527339 ADH1BP00325 375 aa17.69■□□□□ 0.42
LTBP3-208ENST00000527339 CDH6P55285 790 aa17.69■□□□□ 0.42
LTBP3-208ENST00000527339 GSDMDP57764 484 aa17.69■□□□□ 0.42
LTBP3-208ENST00000527339 IRX4P78413 519 aa17.69■□□□□ 0.42
LTBP3-208ENST00000527339 RPL6Q02878 288 aaKnown RBP17.69■□□□□ 0.42
LTBP3-208ENST00000527339 SFSWAPQ12872 951 aaKnown RBP17.69■□□□□ 0.42
LTBP3-208ENST00000527339 SERINC3Q13530 473 aa17.69■□□□□ 0.42
LTBP3-208ENST00000527339 KRT81Q14533 505 aa17.69■□□□□ 0.42
LTBP3-208ENST00000527339 CST6Q15828 149 aa17.69■□□□□ 0.42
LTBP3-208ENST00000527339 UNQ6494/PRO21346Q6UXR6 183 aa17.69■□□□□ 0.42
LTBP3-208ENST00000527339 RAD9BQ6WBX8 426 aa17.69■□□□□ 0.42
LTBP3-208ENST00000527339 DSG4Q86SJ6 1040 aa17.69■□□□□ 0.42
LTBP3-208ENST00000527339 MMAAQ8IVH4 418 aaKnown RBP17.69■□□□□ 0.42
LTBP3-208ENST00000527339 LZTR1Q8N653 840 aa17.69■□□□□ 0.42
LTBP3-208ENST00000527339 PCDH20Q8N6Y1 951 aaKnown RBP17.69■□□□□ 0.42
LTBP3-208ENST00000527339 HMCESQ96FZ2 354 aa17.69■□□□□ 0.42
LTBP3-208ENST00000527339 CSPG4P5Q96PW8 444 aa17.69■□□□□ 0.42
LTBP3-208ENST00000527339 WSB2Q9NYS7 404 aaPredicted RBP17.69■□□□□ 0.42
LTBP3-208ENST00000527339 FARP1Q9Y4F1 1045 aaPredicted RBP17.69■□□□□ 0.42
LTBP3-208ENST00000527339 CELSR3Q9NYQ7 3312 aa17.69■□□□□ 0.42
LTBP3-208ENST00000527339 PI4KAP42356 2102 aa17.68■□□□□ 0.42
LTBP3-208ENST00000527339 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.68■□□□□ 0.42
LTBP3-208ENST00000527339 ARHGAP42A6NI28 874 aa17.68■□□□□ 0.42
LTBP3-208ENST00000527339 NDUFS2O75306 463 aa17.68■□□□□ 0.42
LTBP3-208ENST00000527339 CD160O95971 181 aa17.68■□□□□ 0.42
LTBP3-208ENST00000527339 GJC1P36383 396 aa17.68■□□□□ 0.42
LTBP3-208ENST00000527339 SLC1A1P43005 524 aa17.68■□□□□ 0.42
LTBP3-208ENST00000527339 NOP2P46087 812 aaKnown RBP17.68■□□□□ 0.42
LTBP3-208ENST00000527339 TAS2R40P59535 323 aa17.68■□□□□ 0.42
LTBP3-208ENST00000527339 FOXC1Q12948 553 aa17.68■□□□□ 0.42
LTBP3-208ENST00000527339 AFMIDQ63HM1 303 aa17.68■□□□□ 0.42
LTBP3-208ENST00000527339 USP30Q70CQ3 517 aa17.68■□□□□ 0.42
LTBP3-208ENST00000527339 TMEFF1Q8IYR6 380 aa17.68■□□□□ 0.42
LTBP3-208ENST00000527339 TSC1Q92574 1164 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms