RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 DPP6P42658 865 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 HADHBP55084 474 aaKnown RBP13.2□□□□□ -0.3
CTSB-209ENST00000525315 TAS2R40P59535 323 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 MESDQ14696 234 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 ATP13A4Q4VNC1 1196 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 INO80DQ53TQ3 878 aaPredicted RBP13.2□□□□□ -0.3
CTSB-209ENST00000525315 CARD16Q5EG05 197 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 FAM46CQ5VWP2 391 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 LYSMD4Q5XG99 296 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 C22orf39Q6P5X5 142 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 DSG4Q86SJ6 1040 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 FAM124AQ86V42 546 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 CACUL1Q86Y37 369 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 SYT12Q8IV01 421 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 ARHGAP12Q8IWW6 846 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 KIAA2013Q8IYS2 634 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 AADATQ8N5Z0 425 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 LZTR1Q8N653 840 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 PIP4K2CQ8TBX8 421 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 CASKIN2Q8WXE0 1202 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 DNASE2BQ8WZ79 361 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 FOXJ1Q92949 421 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 CSPG4P5Q96PW8 444 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 BTBD1Q9H0C5 482 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 NEUROG2Q9H2A3 272 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 TMEM74BQ9NUR3 256 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 RCOR3Q9P2K3 495 aaPredicted RBP13.2□□□□□ -0.3
CTSB-209ENST00000525315 FZD4Q9ULV1 537 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 FCF1Q9Y324 198 aaKnown RBP13.2□□□□□ -0.3
CTSB-209ENST00000525315 DMXL1Q9Y485 3027 aa13.2□□□□□ -0.3
CTSB-209ENST00000525315 CACNA1EQ15878 2313 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 ANKRD36A6QL64 1941 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 A0A1W2PP55 124 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 ARHGAP42A6NI28 874 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 SOWAHDA6NJG2 315 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 BUB1O43683 1085 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 FOXD2O60548 495 aaPredicted RBP13.19□□□□□ -0.3
CTSB-209ENST00000525315 KRT7P08729 469 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 ITPKAP23677 461 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 HOXD12P35452 270 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 SSR1P43307 286 aaKnown RBP13.19□□□□□ -0.3
CTSB-209ENST00000525315 PAPOLAP51003 745 aaKnown RBP13.19□□□□□ -0.3
CTSB-209ENST00000525315 CDH6P55285 790 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 PDK2Q15119 407 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 SPA17Q15506 151 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 RAD9BQ6WBX8 426 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 DPY19L3Q6ZPD9 716 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 CYP2U1Q7Z449 544 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 TMEM139Q8IV31 216 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 HDDC3Q8N4P3 179 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 CHST14Q8NCH0 376 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 PIGKQ92643 395 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 CCDC114Q96M63 670 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 OMDQ99983 421 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 TNKS2Q9H2K2 1166 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 ETNK2Q9NVF9 386 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 SERGEFQ9UGK8 458 aa13.19□□□□□ -0.3
CTSB-209ENST00000525315 A0A0A6YYK5 440 aaPredicted RBP13.18□□□□□ -0.3
CTSB-209ENST00000525315 C1QTNF3-AMACRE9PGA6 284 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 BNIP3LO60238 219 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 PRAMEF11O60813 436 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 RNASEH2AO75792 299 aaKnown RBP13.18□□□□□ -0.3
CTSB-209ENST00000525315 SEMA4FO95754 770 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 GSRP00390 522 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 PRNPP04156 253 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 CD48P09326 243 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 SLC1A1P43005 524 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 RECQLP46063 649 aaPredicted RBP13.18□□□□□ -0.3
CTSB-209ENST00000525315 PSMD8P48556 350 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 METAP1P53582 386 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 DPYSL3Q14195 570 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 CYTH1Q15438 398 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 CCDC6Q16204 474 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 ARSIQ5FYB1 569 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 WDR45BQ5MNZ6 344 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 SYCP2LQ5T4T6 812 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 DCAF12L1Q5VU92 463 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 LEKR1Q6ZMV7 388 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 PRR23CQ6ZRP0 262 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 ARMCX6Q7L4S7 300 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 ZNF354CQ86Y25 554 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 NPWQ8N729 165 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 SPC24Q8NBT2 197 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 KCTD6Q8NC69 237 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 GANCQ8TET4 914 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 VOPP1Q96AW1 172 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 CELF6Q96J87 481 aaKnown RBP13.18□□□□□ -0.3
CTSB-209ENST00000525315 HSPA12BQ96MM6 686 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 BAG1Q99933 345 aaPredicted RBP13.18□□□□□ -0.3
CTSB-209ENST00000525315 HEPHQ9BQS7 1158 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 KDM4CQ9H3R0 1056 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 C6orf106Q9H6K1 298 aaPredicted RBP13.18□□□□□ -0.3
CTSB-209ENST00000525315 PDFQ9HBH1 243 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 LUC7LQ9NQ29 371 aaKnown RBP13.18□□□□□ -0.3
CTSB-209ENST00000525315 IL36AQ9UHA7 158 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 EVLQ9UI08 416 aaPredicted RBP13.18□□□□□ -0.3
CTSB-209ENST00000525315 WASF2Q9Y6W5 498 aa13.18□□□□□ -0.3
CTSB-209ENST00000525315 TRPM6Q9BX84 2022 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 TMEM110-MUSTN1A8MSY1 372 aa13.17□□□□□ -0.3
CTSB-209ENST00000525315 PRR5-ARHGAP8B1AHC4 643 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms