RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 LINC00469Q8N7U9 141 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 NHLRC2Q8NBF2 726 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 CAMKVQ8NCB2 501 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 SHCBP1Q8NEM2 672 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 LPCAT1Q8NF37 534 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 OR8K3Q8NH51 312 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 GIMAP7Q8NHV1 300 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 TMEM186Q96B77 213 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 FAM149B1Q96BN6 582 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 PIWIL1Q96J94 861 aaKnown RBP4.61□□□□□ -1.67
CD44-213ENST00000525209 FAM227BQ96M60 508 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 C5orf34Q96MH7 638 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 CAMK1GQ96NX5 476 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 INTS14Q96SY0 518 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 CDK5RAP1Q96SZ6 601 aaKnown RBP4.61□□□□□ -1.67
CD44-213ENST00000525209 MAP7D2Q96T17 732 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 GPR20Q99678 358 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 GAL3ST1Q99999 423 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 CCDC77Q9BR77 488 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 PIMREGQ9BSJ6 248 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 MECRQ9BV79 373 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 NUP85Q9BW27 656 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 FAM83DQ9H4H8 585 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 GORASP2Q9H8Y8 452 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 POLR1BQ9H9Y6 1135 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 SUGCTQ9HAC7 445 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 RPRD1BQ9NQG5 326 aaKnown RBP4.61□□□□□ -1.67
CD44-213ENST00000525209 CENPMQ9NSP4 180 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 ARHGEF38Q9NXL2 777 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 FBXL17Q9UF56 701 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 CLEC4AQ9UMR7 237 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 SUFUQ9UMX1 484 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 PLAGL2Q9UPG8 496 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 TDRKHQ9Y2W6 561 aaKnown RBP4.61□□□□□ -1.67
CD44-213ENST00000525209 ENTPD2Q9Y5L3 495 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 AOX1Q06278 1338 aa4.61□□□□□ -1.67
CD44-213ENST00000525209 LOC100509620A0A075B734 347 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 A0A1W2PQF6 199 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 A0A1W2PR48 441 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 HTR3EA5X5Y0 456 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 MEGF11A6BM72 1044 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 AQP7P3A6NL99 342 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 ANXA2P2A6NMY6 339 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 TBKBP1A7MCY6 615 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 E9PBE3 544 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 CASC3O15234 703 aaKnown RBP4.6□□□□□ -1.67
CD44-213ENST00000525209 PAPSS1O43252 624 aaPredicted RBP4.6□□□□□ -1.67
CD44-213ENST00000525209 CACNG3O60359 315 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 SLCO2B1O94956 709 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 RASAL1O95294 804 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 CER1O95813 267 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 TGFAP01135 160 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 KLKB1P03952 638 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 GRPP07492 148 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 LTA4HP09960 611 aaKnown RBP4.6□□□□□ -1.67
CD44-213ENST00000525209 CCDC192P0DO97 292 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 CCND2P30279 289 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 CHRNA3P32297 505 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 CD68P34810 354 aaPredicted RBP4.6□□□□□ -1.67
CD44-213ENST00000525209 PNPLA4P41247 253 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 PTGER3P43115 390 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 MAGEA8P43361 318 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 VPS41P49754 854 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 RAB28P51157 221 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 CLCNKAP51800 687 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 METAP1P53582 386 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 PER3P56645 1201 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 TFAP4Q01664 338 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 SPAG1Q07617 926 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 NIPAL4Q0D2K0 466 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 IL24Q13007 206 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 IKQ13123 557 aaPredicted RBP4.6□□□□□ -1.67
CD44-213ENST00000525209 PLD1Q13393 1074 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 MTM1Q13496 603 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 GRAPQ13588 217 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 DOC2AQ14183 400 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 ARHGEF6Q15052 776 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 CLPPQ16740 277 aaPredicted RBP4.6□□□□□ -1.67
CD44-213ENST00000525209 LETM2Q2VYF4 491 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 ZNF792Q3KQV3 632 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 KCTD21Q4G0X4 260 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 LRRC24Q50LG9 513 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 PRSS36Q5K4E3 855 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 SFRP5Q5T4F7 317 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 MANEALQ5VSG8 457 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 STEAP3Q658P3 488 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 ABLIM2Q6H8Q1 611 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 KIAA0930Q6ICG6 404 aaPredicted RBP4.6□□□□□ -1.67
CD44-213ENST00000525209 AFTPHQ6ULP2 937 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 ABHD15Q6UXT9 468 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 PACS1Q6VY07 963 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 MED25Q71SY5 747 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 CENPQQ7L2Z9 268 aaPredicted RBP4.6□□□□□ -1.67
CD44-213ENST00000525209 TAS2R42Q7RTR8 314 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 TXNRD3Q86VQ6 643 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 PROSER1Q86XN7 944 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 WFDC8Q8IUA0 241 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 DDIASQ8IXT1 998 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 PQLC1Q8N2U9 271 aa4.6□□□□□ -1.67
CD44-213ENST00000525209 BBS5Q8N3I7 341 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms