RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 MCF2LO15068 1137 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 DCLK1O15075 740 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 MID1O15344 667 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 ARHGAP6O43182 974 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 SLC7A4O43246 635 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 KRT86O43790 486 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 BUB1BO60566 1050 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 PRAMEF11O60813 436 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 PALMO75781 387 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 ZMPSTE24O75844 475 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 TMCC1O94876 653 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 EPN2O95208 641 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 SEMA4FO95754 770 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 GSRP00390 522 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 MT-CO1P00395 513 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 IGLV3-19P01714 112 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 CCDC175P0C221 793 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 VAV1P15498 845 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 TCF4P15884 667 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 MX2P20592 715 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 BCKDHBP21953 392 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 COMTP21964 271 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 XPAP23025 273 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 AMPD1P23109 780 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 GLDCP23378 1020 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 CHRNA3P32297 505 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 HOXD12P35452 270 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 HSPA9P38646 679 aaKnown RBP5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 MPLP40238 635 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 MAPK8P45983 427 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 PAPOLAP51003 745 aaKnown RBP5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 RENBPP51606 427 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 TAS2R40P59535 323 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 ARF5P84085 180 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 LMNB2Q03252 620 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 IL10RBQ08334 325 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 DPYSQ14117 519 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 TFDP2Q14188 446 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 DPYSL3Q14195 570 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 ZNF235Q14590 738 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 GRM3Q14832 879 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 INO80DQ53TQ3 878 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 CARD16Q5EG05 197 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 CCDC181Q5TID7 509 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 TIGD7Q6NT04 549 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 RAD9BQ6WBX8 426 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 LEKR1Q6ZMV7 388 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 CYP4V2Q6ZWL3 525 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 ARMCX6Q7L4S7 300 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 ASCL5Q7RTU5 278 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 ALYREFQ86V81 257 aaKnown RBP5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 VSIG1Q86XK7 387 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 LRRC49Q8IUZ0 686 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 CCDC50Q8IVM0 306 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 PLPP6Q8IY26 295 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 TMEFF1Q8IYR6 380 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 HDDC3Q8N4P3 179 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 SUMF1Q8NBK3 374 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 ACRBPQ8NEB7 543 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 CADM4Q8NFZ8 388 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 OR2AP1Q8NGE2 309 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 PIP4K2CQ8TBX8 421 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 FRS2Q8WU20 508 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 PTPRN2Q92932 1015 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 MYO19Q96H55 970 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 RBM41Q96IZ5 413 aaKnown RBP5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 LRIG1Q96JA1 1093 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 HSPA12BQ96MM6 686 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 ZNF599Q96NL3 588 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 PHOX2BQ99453 314 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 HEPHQ9BQS7 1158 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 GPR174Q9BXC1 333 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 OSBPL1AQ9BXW6 950 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 MAGEB5Q9BZ81 275 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 TM6SF2Q9BZW4 377 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 DUSP15Q9H1R2 295 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 TNKS2Q9H2K2 1166 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 MTG2Q9H4K7 406 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 ZDHHC6Q9H6R6 413 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 LRRC19Q9H756 370 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 CD248Q9HCU0 757 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 VPS45Q9NRW7 570 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 NDFIP2Q9NV92 336 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 KLHL11Q9NVR0 708 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 SEPT3Q9UH03 358 aa5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 FCF1Q9Y324 198 aaKnown RBP5.5□□□□□ -1.53
HMGB1P40-201ENST00000525121 MACROD2A1Z1Q3 448 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 BCLAF3A2AJT9 711 aaKnown RBP5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 CCDC66A2RUB6 948 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 FAM47DPA6NHR8 397 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 PRR5-ARHGAP8B1AHC4 643 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 NEMP1O14524 444 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 PPP1R12AO14974 1030 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 KHNYNO15037 678 aaKnown RBP5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 SMAD6O43541 496 aaKnown RBP5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 FSBPO95073 299 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 ZRANB2O95218 330 aaKnown RBP eCLIP5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 POP4O95707 220 aaKnown RBP5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 CFIP05156 583 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 SDHBP21912 280 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms