RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 SCUBE1Q8IWY4 988 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 TNS4Q8IZW8 715 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 SPATA6LQ8N4H0 392 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 HDAC10Q969S8 669 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 MYLK2Q9H1R3 596 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 POMKQ9H5K3 350 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 GRHL1Q9NZI5 618 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 GABRQQ9UN88 632 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 FAF1Q9UNN5 650 aaPredicted RBP13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 AKAP11Q9UKA4 1901 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 FAM155BO75949 473 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 TSHRP16473 764 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 PTPN4P29074 926 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 HALP42357 657 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 POU5F1Q01860 360 aaKnown RBP13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 CDK18Q07002 472 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 EML3Q32P44 896 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 RNASEH2BQ5TBB1 312 aaKnown RBP13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 NPAS4Q8IUM7 802 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 KCTD4Q8WVF5 259 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 FAXDC2Q96IV6 333 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 OMDQ99983 421 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 YIPF3Q9GZM5 350 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 FAM124BQ9H5Z6 455 aaPredicted RBP13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 KIF17Q9P2E2 1029 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 PNMA8BQ9ULN7 279 aaPredicted RBP13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 PCDHB9Q9Y5E1 797 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 SYNCRIPO60506 623 aaKnown RBP13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 KRT16P08779 473 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 CLEC20AQ6ZU45 233 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 CENPTQ96BT3 561 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 ECSITQ9BQ95 431 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 DOLKQ9UPQ8 538 aa13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 EIF3LQ9Y262 564 aaKnown RBP13.25□□□□□ -0.29
PCDHGB1-201ENST00000523390 BCLAF3A2AJT9 711 aaKnown RBP13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 TLL1O43897 1013 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 BAIAP3O94812 1187 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 POLR2EP19388 210 aaKnown RBP13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 CDK7P50613 346 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 OGDHQ02218 1023 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 PTK2BQ14289 1009 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 STARD3Q14849 445 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 ZNF697Q5TEC3 545 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 PLPP4Q5VZY2 271 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 PACS1Q6VY07 963 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 RBM23Q86U06 439 aaKnown RBP13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 REM2Q8IYK8 340 aaPredicted RBP13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 TMPRSS4Q9NRS4 437 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 AGO1Q9UL18 857 aaKnown RBP13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 GLI3P10071 1580 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 FAM237BA0A1B0GVD1 139 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 FKBP9O95302 570 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 CTPS1P17812 591 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 MSH3P20585 1137 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 FKBP9P1Q75LS8 142 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 DEFB107AQ8IZN7 70 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 FUKQ8N0W3 1084 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 TBC1D19Q8N5T2 526 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 HJURPQ8NCD3 748 aaPredicted RBP13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 SPATA22Q8NHS9 363 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 DNAJC9Q8WXX5 260 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 QKIQ96PU8 341 aaKnown RBP eCLIP13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 MECRQ9BV79 373 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 NFKBIZQ9BYH8 718 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 ASB8Q9H765 288 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 CAB39LQ9H9S4 337 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 CYLDQ9NQC7 956 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 SLC17A7Q9P2U7 560 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 MEI4A8MW99 385 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 E9PAM4 449 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 PDK4Q16654 411 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 PTPRNQ16849 979 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 BNC2Q6ZN30 1099 aaPredicted RBP13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 RNF148Q8N7C7 305 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 ELOVL6Q9H5J4 265 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 CHKBQ9Y259 395 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 ANKRD6Q9Y2G4 727 aa13.24□□□□□ -0.29
PCDHGB1-201ENST00000523390 EVPLLA8MZ36 301 aa13.23□□□□□ -0.29
PCDHGB1-201ENST00000523390 MED21Q13503 144 aa13.23□□□□□ -0.29
PCDHGB1-201ENST00000523390 HIST2H2ACQ16777 129 aaPredicted RBP13.23□□□□□ -0.29
PCDHGB1-201ENST00000523390 C1orf220Q5T0J3 134 aa13.23□□□□□ -0.29
PCDHGB1-201ENST00000523390 CACHD1Q5VU97 1274 aa13.23□□□□□ -0.29
PCDHGB1-201ENST00000523390 HIST2H2AA3Q6FI13 130 aa13.23□□□□□ -0.29
PCDHGB1-201ENST00000523390 SPATA16Q9BXB7 569 aa13.23□□□□□ -0.29
PCDHGB1-201ENST00000523390 C12orf65Q9H3J6 166 aaKnown RBP13.23□□□□□ -0.29
PCDHGB1-201ENST00000523390 Q9Y3F1 56 aa13.23□□□□□ -0.29
PCDHGB1-201ENST00000523390 EOMESO95936 686 aa13.23□□□□□ -0.29
PCDHGB1-201ENST00000523390 CCNG1P51959 295 aa13.23□□□□□ -0.29
PCDHGB1-201ENST00000523390 TLE2Q04725 743 aa13.23□□□□□ -0.29
PCDHGB1-201ENST00000523390 PDE1CQ14123 709 aaPredicted RBP13.23□□□□□ -0.29
PCDHGB1-201ENST00000523390 ACOX1Q15067 660 aa13.23□□□□□ -0.29
PCDHGB1-201ENST00000523390 PFKFB4Q16877 469 aa13.23□□□□□ -0.29
PCDHGB1-201ENST00000523390 ERAP2Q6P179 960 aa13.23□□□□□ -0.29
PCDHGB1-201ENST00000523390 CIR1Q86X95 450 aaPredicted RBP13.23□□□□□ -0.29
PCDHGB1-201ENST00000523390 ZNF567Q8N184 647 aa13.23□□□□□ -0.29
PCDHGB1-201ENST00000523390 CRYBG2Q8N1P7 616 aa13.23□□□□□ -0.29
PCDHGB1-201ENST00000523390 IRGQQ8WZA9 623 aa13.23□□□□□ -0.29
PCDHGB1-201ENST00000523390 NRBF2Q96F24 287 aa13.23□□□□□ -0.29
PCDHGB1-201ENST00000523390 ACE2Q9BYF1 805 aaPredicted RBP13.23□□□□□ -0.29
PCDHGB1-201ENST00000523390 BCO2Q9BYV7 579 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms