RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 HAUS4Q9H6D7 363 aa19.09■□□□□ 0.65
SPIDR-220ENST00000522900 TMEM248Q9NWD8 314 aa19.09■□□□□ 0.65
SPIDR-220ENST00000522900 FCF1Q9Y324 198 aaKnown RBP19.09■□□□□ 0.65
SPIDR-220ENST00000522900 PCNX2A6NKB5 2137 aa19.08■□□□□ 0.64
SPIDR-220ENST00000522900 C1QTNF9BB2RNN3 333 aa19.08■□□□□ 0.64
SPIDR-220ENST00000522900 KPNA3O00505 521 aaPredicted RBP19.08■□□□□ 0.64
SPIDR-220ENST00000522900 C1QTNF9P0C862 333 aa19.08■□□□□ 0.64
SPIDR-220ENST00000522900 CD38P28907 300 aa19.08■□□□□ 0.64
SPIDR-220ENST00000522900 SERPINH1P50454 418 aaKnown RBP19.08■□□□□ 0.64
SPIDR-220ENST00000522900 DNA2P51530 1060 aa19.08■□□□□ 0.64
SPIDR-220ENST00000522900 SLC20A2Q08357 652 aa19.08■□□□□ 0.64
SPIDR-220ENST00000522900 SCAPQ12770 1279 aa19.08■□□□□ 0.64
SPIDR-220ENST00000522900 ASIC2Q16515 512 aa19.08■□□□□ 0.64
SPIDR-220ENST00000522900 LEKR1Q6ZMV7 388 aa19.08■□□□□ 0.64
SPIDR-220ENST00000522900 ZNF571Q7Z3V5 609 aaPredicted RBP19.08■□□□□ 0.64
SPIDR-220ENST00000522900 PNPLA1Q8N8W4 532 aa19.08■□□□□ 0.64
SPIDR-220ENST00000522900 GRIN3AQ8TCU5 1115 aa19.08■□□□□ 0.64
SPIDR-220ENST00000522900 CBX8Q9HC52 389 aa19.08■□□□□ 0.64
SPIDR-220ENST00000522900 AIPL1Q9NZN9 384 aa19.08■□□□□ 0.64
SPIDR-220ENST00000522900 PCDHGB2Q9Y5G2 931 aa19.08■□□□□ 0.64
SPIDR-220ENST00000522900 FRYQ5TBA9 3013 aa19.08■□□□□ 0.64
SPIDR-220ENST00000522900 A0A1W2PQC6 194 aa19.07■□□□□ 0.64
SPIDR-220ENST00000522900 ATMINO43313 823 aaPredicted RBP19.07■□□□□ 0.64
SPIDR-220ENST00000522900 LEFTY1O75610 366 aa19.07■□□□□ 0.64
SPIDR-220ENST00000522900 SERPINC1P01008 464 aa19.07■□□□□ 0.64
SPIDR-220ENST00000522900 MAPKAPK2P49137 400 aa19.07■□□□□ 0.64
SPIDR-220ENST00000522900 MAMLD1Q13495 774 aa19.07■□□□□ 0.64
SPIDR-220ENST00000522900 DCUN1D2Q6PH85 259 aa19.07■□□□□ 0.64
SPIDR-220ENST00000522900 PRPF39Q86UA1 669 aaKnown RBP19.07■□□□□ 0.64
SPIDR-220ENST00000522900 SLCO6A1Q86UG4 719 aa19.07■□□□□ 0.64
SPIDR-220ENST00000522900 LUZP1Q86V48 1076 aa19.07■□□□□ 0.64
SPIDR-220ENST00000522900 BAHD1Q8TBE0 780 aaPredicted RBP19.07■□□□□ 0.64
SPIDR-220ENST00000522900 RHBDD1Q8TEB9 315 aa19.07■□□□□ 0.64
SPIDR-220ENST00000522900 KLK6Q92876 244 aa19.07■□□□□ 0.64
SPIDR-220ENST00000522900 CCDC114Q96M63 670 aa19.07■□□□□ 0.64
SPIDR-220ENST00000522900 CNPY3Q9BT09 278 aa19.07■□□□□ 0.64
SPIDR-220ENST00000522900 TTYH3Q9C0H2 523 aa19.07■□□□□ 0.64
SPIDR-220ENST00000522900 NOL6Q9H6R4 1146 aaKnown RBP19.07■□□□□ 0.64
SPIDR-220ENST00000522900 IL36AQ9UHA7 158 aa19.07■□□□□ 0.64
SPIDR-220ENST00000522900 KLK13Q9UKR3 277 aa19.07■□□□□ 0.64
SPIDR-220ENST00000522900 FZD10Q9ULW2 581 aa19.07■□□□□ 0.64
SPIDR-220ENST00000522900 CA5BQ9Y2D0 317 aa19.07■□□□□ 0.64
SPIDR-220ENST00000522900 WASF2Q9Y6W5 498 aa19.07■□□□□ 0.64
SPIDR-220ENST00000522900 PLXNA2O75051 1894 aa19.06■□□□□ 0.64
SPIDR-220ENST00000522900 NYNRINQ9P2P1 1898 aaKnown RBP19.06■□□□□ 0.64
SPIDR-220ENST00000522900 A0A1B0GTQ1 180 aa19.06■□□□□ 0.64
SPIDR-220ENST00000522900 ANKRD62A6NC57 917 aa19.06■□□□□ 0.64
SPIDR-220ENST00000522900 DDX3XO00571 662 aaKnown RBP eCLIP19.06■□□□□ 0.64
SPIDR-220ENST00000522900 FLRT2O43155 660 aa19.06■□□□□ 0.64
SPIDR-220ENST00000522900 RNGTTO60942 597 aaKnown RBP19.06■□□□□ 0.64
SPIDR-220ENST00000522900 PRNPP04156 253 aa19.06■□□□□ 0.64
SPIDR-220ENST00000522900 FTH1P19P0C7X4 201 aa19.06■□□□□ 0.64
SPIDR-220ENST00000522900 SKILP12757 684 aa19.06■□□□□ 0.64
SPIDR-220ENST00000522900 L1CAMP32004 1257 aa19.06■□□□□ 0.64
SPIDR-220ENST00000522900 GKP32189 559 aa19.06■□□□□ 0.64
SPIDR-220ENST00000522900 RECQLP46063 649 aaPredicted RBP19.06■□□□□ 0.64
SPIDR-220ENST00000522900 SHBQ15464 509 aa19.06■□□□□ 0.64
SPIDR-220ENST00000522900 KLHL40Q2TBA0 621 aa19.06■□□□□ 0.64
SPIDR-220ENST00000522900 CARD16Q5EG05 197 aa19.06■□□□□ 0.64
SPIDR-220ENST00000522900 SFMBT2Q5VUG0 894 aa19.06■□□□□ 0.64
SPIDR-220ENST00000522900 TRIM69Q86WT6 500 aa19.06■□□□□ 0.64
SPIDR-220ENST00000522900 VCPIP1Q96JH7 1222 aa19.06■□□□□ 0.64
SPIDR-220ENST00000522900 TMEM121BQ9BXQ6 578 aaPredicted RBP19.06■□□□□ 0.64
SPIDR-220ENST00000522900 CEP44Q9C0F1 390 aa19.06■□□□□ 0.64
SPIDR-220ENST00000522900 KLC2Q9H0B6 622 aa19.06■□□□□ 0.64
SPIDR-220ENST00000522900 MAGEH1Q9H213 219 aa19.06■□□□□ 0.64
SPIDR-220ENST00000522900 RETREG1Q9H6L5 497 aa19.06■□□□□ 0.64
SPIDR-220ENST00000522900 CHD8Q9HCK8 2581 aa19.06■□□□□ 0.64
SPIDR-220ENST00000522900 ACACBO00763 2458 aa19.06■□□□□ 0.64
SPIDR-220ENST00000522900 TLR4O00206 839 aa19.05■□□□□ 0.64
SPIDR-220ENST00000522900 CREB3O43889 395 aa19.05■□□□□ 0.64
SPIDR-220ENST00000522900 EPHB2P29323 1055 aa19.05■□□□□ 0.64
SPIDR-220ENST00000522900 CCT8P50990 548 aa19.05■□□□□ 0.64
SPIDR-220ENST00000522900 CCNHP51946 323 aaPredicted RBP19.05■□□□□ 0.64
SPIDR-220ENST00000522900 NXPH1P58417 271 aa19.05■□□□□ 0.64
SPIDR-220ENST00000522900 SUZ12Q15022 739 aaKnown RBP19.05■□□□□ 0.64
SPIDR-220ENST00000522900 POLD3Q15054 466 aaPredicted RBP19.05■□□□□ 0.64
SPIDR-220ENST00000522900 ST3GAL2Q16842 350 aa19.05■□□□□ 0.64
SPIDR-220ENST00000522900 EFHC2Q5JST6 749 aa19.05■□□□□ 0.64
SPIDR-220ENST00000522900 NAPEPLDQ6IQ20 393 aa19.05■□□□□ 0.64
SPIDR-220ENST00000522900 PLEKHA7Q6IQ23 1121 aa19.05■□□□□ 0.64
SPIDR-220ENST00000522900 ERN2Q76MJ5 926 aaKnown RBP19.05■□□□□ 0.64
SPIDR-220ENST00000522900 RAB44Q7Z6P3 723 aaPredicted RBP19.05■□□□□ 0.64
SPIDR-220ENST00000522900 GLRX5Q86SX6 157 aa19.05■□□□□ 0.64
SPIDR-220ENST00000522900 GATAD2AQ86YP4 633 aa19.05■□□□□ 0.64
SPIDR-220ENST00000522900 ARFGAP1Q8N6T3 406 aa19.05■□□□□ 0.64
SPIDR-220ENST00000522900 PCDH20Q8N6Y1 951 aaKnown RBP19.05■□□□□ 0.64
SPIDR-220ENST00000522900 NETO2Q8NC67 525 aa19.05■□□□□ 0.64
SPIDR-220ENST00000522900 VOPP1Q96AW1 172 aa19.05■□□□□ 0.64
SPIDR-220ENST00000522900 ELF4Q99607 663 aaPredicted RBP19.05■□□□□ 0.64
SPIDR-220ENST00000522900 HEPHQ9BQS7 1158 aa19.05■□□□□ 0.64
SPIDR-220ENST00000522900 TM6SF2Q9BZW4 377 aa19.05■□□□□ 0.64
SPIDR-220ENST00000522900 PREBQ9HCU5 417 aa19.05■□□□□ 0.64
SPIDR-220ENST00000522900 GPATCH2LQ9NWQ4 482 aa19.05■□□□□ 0.64
SPIDR-220ENST00000522900 TPX2Q9ULW0 747 aaKnown RBP19.05■□□□□ 0.64
SPIDR-220ENST00000522900 DOCK4Q8N1I0 1966 aa19.04■□□□□ 0.64
SPIDR-220ENST00000522900 TPRP12270 2363 aaKnown RBP19.04■□□□□ 0.64
SPIDR-220ENST00000522900 A0A1W2PQU0 124 aa19.04■□□□□ 0.64
SPIDR-220ENST00000522900 PCDHGA12O60330 932 aa19.04■□□□□ 0.64
SPIDR-220ENST00000522900 RAMP2O60895 175 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms