RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 ARHGEF2Q92974 986 aaKnown RBP17.42■□□□□ 0.38
SQLE-205ENST00000521232 TBC1D31Q96DN5 1066 aa17.42■□□□□ 0.38
SQLE-205ENST00000521232 SLC6A18Q96N87 628 aa17.42■□□□□ 0.38
SQLE-205ENST00000521232 MAGEH1Q9H213 219 aa17.42■□□□□ 0.38
SQLE-205ENST00000521232 ARHGAP20Q9P2F6 1191 aa17.42■□□□□ 0.38
SQLE-205ENST00000521232 DNAI1Q9UI46 699 aa17.42■□□□□ 0.38
SQLE-205ENST00000521232 ASPMQ8IZT6 3477 aa17.41■□□□□ 0.38
SQLE-205ENST00000521232 CBFA2T3O75081 653 aa17.41■□□□□ 0.38
SQLE-205ENST00000521232 PRNPP04156 253 aa17.41■□□□□ 0.38
SQLE-205ENST00000521232 ACVRL1P37023 503 aa17.41■□□□□ 0.38
SQLE-205ENST00000521232 AIF1P55008 147 aa17.41■□□□□ 0.38
SQLE-205ENST00000521232 FOXC1Q12948 553 aa17.41■□□□□ 0.38
SQLE-205ENST00000521232 MAMLD1Q13495 774 aa17.41■□□□□ 0.38
SQLE-205ENST00000521232 TRIP6Q15654 476 aaKnown RBP17.41■□□□□ 0.38
SQLE-205ENST00000521232 ZNF423Q2M1K9 1284 aa17.41■□□□□ 0.38
SQLE-205ENST00000521232 E4F1Q66K89 784 aaPredicted RBP17.41■□□□□ 0.38
SQLE-205ENST00000521232 PLEKHA7Q6IQ23 1121 aa17.41■□□□□ 0.38
SQLE-205ENST00000521232 SCYL2Q6P3W7 929 aa17.41■□□□□ 0.38
SQLE-205ENST00000521232 LAYNQ6UX15 382 aa17.41■□□□□ 0.38
SQLE-205ENST00000521232 DPY19L3Q6ZPD9 716 aa17.41■□□□□ 0.38
SQLE-205ENST00000521232 ADAT2Q7Z6V5 191 aaKnown RBP17.41■□□□□ 0.38
SQLE-205ENST00000521232 PRPF39Q86UA1 669 aaKnown RBP17.41■□□□□ 0.38
SQLE-205ENST00000521232 PLPP6Q8IY26 295 aa17.41■□□□□ 0.38
SQLE-205ENST00000521232 PCDH20Q8N6Y1 951 aaKnown RBP17.41■□□□□ 0.38
SQLE-205ENST00000521232 CHST14Q8NCH0 376 aa17.41■□□□□ 0.38
SQLE-205ENST00000521232 SKA1Q96BD8 255 aa17.41■□□□□ 0.38
SQLE-205ENST00000521232 TNKS2Q9H2K2 1166 aa17.41■□□□□ 0.38
SQLE-205ENST00000521232 PARVAQ9NVD7 372 aa17.41■□□□□ 0.38
SQLE-205ENST00000521232 PCOLCE2Q9UKZ9 415 aa17.41■□□□□ 0.38
SQLE-205ENST00000521232 FZD10Q9ULW2 581 aa17.41■□□□□ 0.38
SQLE-205ENST00000521232 PCDHB9Q9Y5E1 797 aa17.41■□□□□ 0.38
SQLE-205ENST00000521232 A0A1W2PR77 199 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 TMCO5BA8MYB1 307 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 RNF103O00237 685 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 KCNK3O14649 394 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 WNT9AO14904 365 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 DFNA5O60443 496 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 WNT1P04628 370 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 CD38P28907 300 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 NUDT1P36639 197 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 RECQLP46063 649 aaPredicted RBP17.4■□□□□ 0.38
SQLE-205ENST00000521232 C21orf59P57076 290 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 TAS2R38P59533 333 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 PPP2CBP62714 309 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 PPP2CAP67775 309 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 TPM4P67936 248 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 FANCCQ00597 558 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 OGDHQ02218 1023 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 CCDC15Q0P6D6 951 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 SUZ12Q15022 739 aaKnown RBP17.4■□□□□ 0.38
SQLE-205ENST00000521232 POM121L1PQ3SYA9 428 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 ARSIQ5FYB1 569 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 EFHC2Q5JST6 749 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 PIP5KL1Q5T9C9 394 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 LUZP1Q86V48 1076 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 TRIM69Q86WT6 500 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 PYROXD2Q8N2H3 581 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 ISG20Q96AZ6 181 aaKnown RBP17.4■□□□□ 0.38
SQLE-205ENST00000521232 ARRDC3Q96B67 414 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 PREBQ9HCU5 417 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 IL36AQ9UHA7 158 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 WASF2Q9Y6W5 498 aa17.4■□□□□ 0.38
SQLE-205ENST00000521232 AKAP13Q12802 2813 aa17.39■□□□□ 0.38
SQLE-205ENST00000521232 TP53BP1Q12888 1972 aaPredicted RBP17.39■□□□□ 0.37
SQLE-205ENST00000521232 WASH4PA8MWX3 477 aa17.39■□□□□ 0.37
SQLE-205ENST00000521232 H0Y8X5 98 aa17.39■□□□□ 0.37
SQLE-205ENST00000521232 KPNA3O00505 521 aaPredicted RBP17.39■□□□□ 0.37
SQLE-205ENST00000521232 DDX3XO00571 662 aaKnown RBP eCLIP17.39■□□□□ 0.374e-43■■■■■ 55.5
SQLE-205ENST00000521232 PCDHGA12O60330 932 aa17.39■□□□□ 0.37
SQLE-205ENST00000521232 RAMP2O60895 175 aa17.39■□□□□ 0.37
SQLE-205ENST00000521232 TRIM16O95361 564 aa17.39■□□□□ 0.37
SQLE-205ENST00000521232 FTLP02792 175 aaPredicted RBP17.39■□□□□ 0.37
SQLE-205ENST00000521232 PTMSP20962 102 aa17.39■□□□□ 0.37
SQLE-205ENST00000521232 PBX1P40424 430 aa17.39■□□□□ 0.37
SQLE-205ENST00000521232 KLHL30Q0D2K2 578 aa17.39■□□□□ 0.37
SQLE-205ENST00000521232 POLD3Q15054 466 aaPredicted RBP17.39■□□□□ 0.37
SQLE-205ENST00000521232 CARD16Q5EG05 197 aa17.39■□□□□ 0.37
SQLE-205ENST00000521232 NEK5Q6P3R8 708 aa17.39■□□□□ 0.37
SQLE-205ENST00000521232 TMC6Q7Z403 805 aa17.39■□□□□ 0.37
SQLE-205ENST00000521232 GLRX5Q86SX6 157 aa17.39■□□□□ 0.37
SQLE-205ENST00000521232 RTL3Q8N8U3 475 aaKnown RBP17.39■□□□□ 0.37
SQLE-205ENST00000521232 SETD7Q8WTS6 366 aaKnown RBP17.39■□□□□ 0.37
SQLE-205ENST00000521232 SERAC1Q96JX3 654 aa17.39■□□□□ 0.37
SQLE-205ENST00000521232 HDAC8Q9BY41 377 aa17.39■□□□□ 0.37
SQLE-205ENST00000521232 AASDHPPTQ9NRN7 309 aa17.39■□□□□ 0.37
SQLE-205ENST00000521232 HPCAL4Q9UM19 191 aa17.39■□□□□ 0.37
SQLE-205ENST00000521232 DMTF1Q9Y222 760 aa17.39■□□□□ 0.37
SQLE-205ENST00000521232 FCF1Q9Y324 198 aaKnown RBP17.39■□□□□ 0.37
SQLE-205ENST00000521232 ACTL7AQ9Y615 435 aa17.39■□□□□ 0.37
SQLE-205ENST00000521232 A0A1W2PQJ5 194 aa17.38■□□□□ 0.37
SQLE-205ENST00000521232 TMEM191CA6NGB0 347 aa17.38■□□□□ 0.37
SQLE-205ENST00000521232 FLRT2O43155 660 aa17.38■□□□□ 0.37
SQLE-205ENST00000521232 KDELR3O43731 214 aa17.38■□□□□ 0.37
SQLE-205ENST00000521232 LEFTY1O75610 366 aa17.38■□□□□ 0.37
SQLE-205ENST00000521232 TOP3BO95985 862 aaKnown RBP17.38■□□□□ 0.37
SQLE-205ENST00000521232 DESP17661 470 aa17.38■□□□□ 0.37
SQLE-205ENST00000521232 EPHB2P29323 1055 aa17.38■□□□□ 0.37
SQLE-205ENST00000521232 UBASH3AP57075 661 aa17.38■□□□□ 0.37
SQLE-205ENST00000521232 GEMIN4P57678 1058 aaKnown RBP17.38■□□□□ 0.37
SQLE-205ENST00000521232 NAPEPLDQ6IQ20 393 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms