RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 SLC46A1Q96NT5 459 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 PRMT1Q99873 361 aaKnown RBP11.77□□□□□ -0.53
MRPS28-206ENST00000520946 SPON2Q9BUD6 331 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 SRRTQ9BXP5 876 aaKnown RBP11.77□□□□□ -0.53
MRPS28-206ENST00000520946 SLC17A9Q9BYT1 436 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 GOLPH3LQ9H4A5 285 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 DOLKQ9UPQ8 538 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 PAXBP1Q9Y5B6 917 aa11.77□□□□□ -0.53
MRPS28-206ENST00000520946 M0QYT0 321 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 MUSKO15146 869 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 PMM2O15305 246 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 AQP9O43315 295 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 HSF2BPO75031 334 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 PAGE1O75459 146 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 TNFSF15O95150 251 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 WISP1O95388 367 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 GJB6O95452 261 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 PAK4O96013 591 aaPredicted RBP11.76□□□□□ -0.53
MRPS28-206ENST00000520946 ANXA6P08133 673 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 GLI1P08151 1106 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 SRCP12931 536 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 TGM2P21980 687 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 RRM1P23921 792 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 CLCN6P51797 869 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 THOP1P52888 689 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 PITX1P78337 314 aaPredicted RBP11.76□□□□□ -0.53
MRPS28-206ENST00000520946 PDCLQ13371 301 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 PDE1CQ14123 709 aaPredicted RBP11.76□□□□□ -0.53
MRPS28-206ENST00000520946 SPIDRQ14159 915 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 PTK2BQ14289 1009 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 TAF5Q15542 800 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 DEFB133Q30KQ1 61 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 C6orf132Q5T0Z8 1188 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 ISM2Q6H9L7 571 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 RETSATQ6NUM9 610 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 ESRP1Q6NXG1 681 aaKnown RBP11.76□□□□□ -0.53
MRPS28-206ENST00000520946 CRTC1Q6UUV9 634 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 GCNT7Q6ZNI0 430 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 TMEM110Q86TL2 294 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 JAMLQ86YT9 394 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 ARHGEF19Q8IW93 802 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 ZNF548Q8NEK5 533 aaPredicted RBP11.76□□□□□ -0.53
MRPS28-206ENST00000520946 WDR36Q8NI36 951 aaKnown RBP11.76□□□□□ -0.53
MRPS28-206ENST00000520946 WDR48Q8TAF3 677 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 BTN2A2Q8WVV5 523 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 DHTKD1Q96HY7 919 aaPredicted RBP11.76□□□□□ -0.53
MRPS28-206ENST00000520946 PPP1R13BQ96KQ4 1090 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 HDAC8Q9BY41 377 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 TNKS2Q9H2K2 1166 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 WDCPQ9H6R7 721 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 ASCL3Q9NQ33 180 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 SPASTQ9UBP0 616 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 HS3ST2Q9Y278 367 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.76□□□□□ -0.53
MRPS28-206ENST00000520946 CSNK1G3Q9Y6M4 447 aa11.76□□□□□ -0.53
MRPS28-206ENST00000520946 SETXQ7Z333 2677 aaKnown RBP11.76□□□□□ -0.53
MRPS28-206ENST00000520946 BICDL2A1A5D9 508 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 K7ENP7 123 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 SNAP91O60641 907 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 LEFTY1O75610 366 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 TCEA3O75764 348 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 MT-CO1P00395 513 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 IGLV3-25P01717 112 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 AFPP02771 609 aaKnown RBP11.75□□□□□ -0.53
MRPS28-206ENST00000520946 CSF2P04141 144 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 CTSLP07711 333 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 NME1P15531 152 aaKnown RBP11.75□□□□□ -0.53
MRPS28-206ENST00000520946 OR1E1P30953 314 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 GGCXP38435 758 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 RPL34P49207 117 aaKnown RBP11.75□□□□□ -0.53
MRPS28-206ENST00000520946 NFATC3Q12968 1075 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 COBLL1Q53SF7 1204 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 GUSBP11Q6P575 273 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 INO80CQ6PI98 192 aaPredicted RBP11.75□□□□□ -0.53
MRPS28-206ENST00000520946 LINGO4Q6UY18 593 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 KYAT3Q6YP21 454 aaKnown RBP11.75□□□□□ -0.53
MRPS28-206ENST00000520946 C11orf57Q6ZUT1 292 aaPredicted RBP11.75□□□□□ -0.53
MRPS28-206ENST00000520946 USP53Q70EK8 1073 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 ABI3BPQ7Z7G0 1075 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 SETD3Q86TU7 594 aaPredicted RBP11.75□□□□□ -0.53
MRPS28-206ENST00000520946 SLC22A18ASQ8N1D0 253 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 OR2A12Q8NGT7 310 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 SCG3Q8WXD2 468 aaKnown RBP11.75□□□□□ -0.53
MRPS28-206ENST00000520946 TTC9Q92623 222 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 NAT6Q93015 286 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 ALG14Q96F25 216 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 FAM81BQ96LP2 452 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 CCNL2Q96S94 520 aaPredicted RBP11.75□□□□□ -0.53
MRPS28-206ENST00000520946 SLC13A1Q9BZW2 595 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 SEMA4CQ9C0C4 833 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 INTS2Q9H0H0 1204 aaKnown RBP11.75□□□□□ -0.53
MRPS28-206ENST00000520946 PDCL3Q9H2J4 239 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 ASNSD1Q9NWL6 643 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 VPS51Q9UID3 782 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 SALL4Q9UJQ4 1053 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 TBC1D30Q9Y2I9 924 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 PCDHGA8Q9Y5G5 932 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 HS3ST4Q9Y661 456 aa11.75□□□□□ -0.53
MRPS28-206ENST00000520946 DOCK9Q9BZ29 2069 aa11.74□□□□□ -0.53
MRPS28-206ENST00000520946 ZNF462Q96JM2 2506 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms