RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 PHF2O75151 1096 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 CD160O95971 181 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 PEX11BO96011 259 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 HLA-EP13747 358 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 HOXB2P14652 356 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 PRKCHP24723 683 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 CCR3P51677 355 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 EIF3EP60228 445 aaKnown RBP15.62■□□□□ 0.09
LSM1-203ENST00000520755 ARF5P84085 180 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 C2orf54Q08AI8 447 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 E2F5Q15329 346 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 CCNG2Q16589 344 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 HSF5Q4G112 596 aaPredicted RBP15.62■□□□□ 0.09
LSM1-203ENST00000520755 DNTTIP2Q5QJE6 756 aaKnown RBP15.62■□□□□ 0.09
LSM1-203ENST00000520755 LINGO4Q6UY18 593 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 ATPAF2Q8N5M1 289 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 ZNF366Q8N895 744 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 TTC13Q8NBP0 860 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 MAIP1Q8WWC4 291 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 NKD2Q969F2 451 aaPredicted RBP15.62■□□□□ 0.09
LSM1-203ENST00000520755 MRGPRX3Q96LB0 322 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 HPCAL4Q9UM19 191 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 SLC8A2Q9UPR5 921 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 MYLKQ15746 1914 aa15.62■□□□□ 0.09
LSM1-203ENST00000520755 MCF2LO15068 1137 aa15.61■□□□□ 0.09
LSM1-203ENST00000520755 NPC1O15118 1278 aa15.61■□□□□ 0.09
LSM1-203ENST00000520755 LAMTOR5O43504 91 aa15.61■□□□□ 0.09
LSM1-203ENST00000520755 PRAMEF11O60813 436 aa15.61■□□□□ 0.09
LSM1-203ENST00000520755 SRPRAP08240 638 aaKnown RBP15.61■□□□□ 0.09
LSM1-203ENST00000520755 RBP3P10745 1247 aa15.61■□□□□ 0.09
LSM1-203ENST00000520755 PAFAH1B1P43034 410 aa15.61■□□□□ 0.09
LSM1-203ENST00000520755 CXCL12P48061 93 aa15.61■□□□□ 0.09
LSM1-203ENST00000520755 NRLP54845 237 aa15.61■□□□□ 0.09
LSM1-203ENST00000520755 XRCC4Q13426 336 aa15.61■□□□□ 0.09
LSM1-203ENST00000520755 SNX1Q13596 522 aa15.61■□□□□ 0.09
LSM1-203ENST00000520755 TUBB2AQ13885 445 aa15.61■□□□□ 0.09
LSM1-203ENST00000520755 PDK1Q15118 436 aa15.61■□□□□ 0.09
LSM1-203ENST00000520755 KCTD19Q17RG1 926 aaPredicted RBP15.61■□□□□ 0.09
LSM1-203ENST00000520755 SLC45A4Q5BKX6 768 aa15.61■□□□□ 0.09
LSM1-203ENST00000520755 DRICH1Q6PGQ1 229 aaPredicted RBP15.61■□□□□ 0.09
LSM1-203ENST00000520755 SYT13Q7L8C5 426 aa15.61■□□□□ 0.09
LSM1-203ENST00000520755 C1orf210Q8IVY1 113 aa15.61■□□□□ 0.09
LSM1-203ENST00000520755 LRRN4CLQ8ND94 238 aa15.61■□□□□ 0.09
LSM1-203ENST00000520755 SPATA4Q8NEY3 305 aa15.61■□□□□ 0.09
LSM1-203ENST00000520755 MYO19Q96H55 970 aa15.61■□□□□ 0.09
LSM1-203ENST00000520755 TSGA13Q96PP4 275 aa15.61■□□□□ 0.09
LSM1-203ENST00000520755 GABRG3Q99928 467 aa15.61■□□□□ 0.09
LSM1-203ENST00000520755 TUBB2BQ9BVA1 445 aa15.61■□□□□ 0.09
LSM1-203ENST00000520755 DDX47Q9H0S4 455 aaKnown RBP15.61■□□□□ 0.09
LSM1-203ENST00000520755 IPO11Q9UI26 975 aaKnown RBP15.61■□□□□ 0.09
LSM1-203ENST00000520755 SLCO3A1Q9UIG8 710 aa15.61■□□□□ 0.09
LSM1-203ENST00000520755 CACNA1IQ9P0X4 2223 aa15.6■□□□□ 0.09
LSM1-203ENST00000520755 ZNF318Q5VUA4 2279 aa15.6■□□□□ 0.09
LSM1-203ENST00000520755 PPP1R12AO14974 1030 aaPredicted RBP15.6■□□□□ 0.09
LSM1-203ENST00000520755 KDELR3O43731 214 aa15.6■□□□□ 0.09
LSM1-203ENST00000520755 EPHX1P07099 455 aa15.6■□□□□ 0.09
LSM1-203ENST00000520755 MX2P20592 715 aa15.6■□□□□ 0.09
LSM1-203ENST00000520755 COL9A1P20849 921 aa15.6■□□□□ 0.09
LSM1-203ENST00000520755 RBL1P28749 1068 aa15.6■□□□□ 0.09
LSM1-203ENST00000520755 NNMTP40261 264 aa15.6■□□□□ 0.09
LSM1-203ENST00000520755 KCNJ1P48048 391 aa15.6■□□□□ 0.09
LSM1-203ENST00000520755 GDF10P55107 478 aa15.6■□□□□ 0.09
LSM1-203ENST00000520755 CKAP4Q07065 602 aaKnown RBP15.6■□□□□ 0.09
LSM1-203ENST00000520755 CRY1Q16526 586 aa15.6■□□□□ 0.09
LSM1-203ENST00000520755 RETSATQ6NUM9 610 aa15.6■□□□□ 0.09
LSM1-203ENST00000520755 TSSK4Q6SA08 328 aa15.6■□□□□ 0.09
LSM1-203ENST00000520755 TMEM92Q6UXU6 159 aa15.6■□□□□ 0.09
LSM1-203ENST00000520755 LEKR1Q6ZMV7 388 aa15.6■□□□□ 0.09
LSM1-203ENST00000520755 ATP11CQ8NB49 1132 aa15.6■□□□□ 0.09
LSM1-203ENST00000520755 HHIPQ96QV1 700 aa15.6■□□□□ 0.09
LSM1-203ENST00000520755 FRMD8P1Q9BZ68 369 aaPredicted RBP15.6■□□□□ 0.09
LSM1-203ENST00000520755 TMEM245Q9H330 911 aa15.6■□□□□ 0.09
LSM1-203ENST00000520755 MTG2Q9H4K7 406 aa15.6■□□□□ 0.09
LSM1-203ENST00000520755 GOLGA6L10A0A0M3HER8 536 aa15.59■□□□□ 0.09
LSM1-203ENST00000520755 BCLAF3A2AJT9 711 aaKnown RBP15.59■□□□□ 0.09
LSM1-203ENST00000520755 TTC34A8MYJ7 566 aa15.59■□□□□ 0.09
LSM1-203ENST00000520755 HACD1B0YJ81 288 aa15.59■□□□□ 0.09
LSM1-203ENST00000520755 H7C0C1 242 aa15.59■□□□□ 0.09
LSM1-203ENST00000520755 SYNCRIPO60506 623 aaKnown RBP15.59■□□□□ 0.09
LSM1-203ENST00000520755 MT-CO1P00395 513 aa15.59■□□□□ 0.09
LSM1-203ENST00000520755 ATP5OP48047 213 aa15.59■□□□□ 0.09
LSM1-203ENST00000520755 CLCN6P51797 869 aa15.59■□□□□ 0.09
LSM1-203ENST00000520755 IL10RBQ08334 325 aa15.59■□□□□ 0.09
LSM1-203ENST00000520755 ZBTB17Q13105 803 aa15.59■□□□□ 0.09
LSM1-203ENST00000520755 ENPP2Q13822 863 aa15.59■□□□□ 0.09
LSM1-203ENST00000520755 BYSLQ13895 437 aaKnown RBP15.59■□□□□ 0.09
LSM1-203ENST00000520755 STARD3Q14849 445 aa15.59■□□□□ 0.09
LSM1-203ENST00000520755 ACCSLQ4AC99 568 aa15.59■□□□□ 0.09
LSM1-203ENST00000520755 KIAA1211LQ6NV74 962 aa15.59■□□□□ 0.09
LSM1-203ENST00000520755 MAMSTRQ6ZN01 415 aa15.59■□□□□ 0.09
LSM1-203ENST00000520755 CDKL3Q8IVW4 592 aaPredicted RBP15.59■□□□□ 0.09
LSM1-203ENST00000520755 CCDC13Q8IYE1 715 aa15.59■□□□□ 0.09
LSM1-203ENST00000520755 SH2D3CQ8N5H7 860 aa15.59■□□□□ 0.09
LSM1-203ENST00000520755 GLIS1Q8NBF1 620 aa15.59■□□□□ 0.09
LSM1-203ENST00000520755 TFB1MQ8WVM0 346 aaKnown RBP15.59■□□□□ 0.09
LSM1-203ENST00000520755 MAML1Q92585 1016 aa15.59■□□□□ 0.09
LSM1-203ENST00000520755 MAGOHBQ96A72 148 aaKnown RBP15.59■□□□□ 0.09
LSM1-203ENST00000520755 TMEM121Q9BTD3 319 aa15.59■□□□□ 0.09
LSM1-203ENST00000520755 SP110Q9HB58 689 aa15.59■□□□□ 0.09
LSM1-203ENST00000520755 USP29Q9HBJ7 922 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms