RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 CCDC137Q6PK04 289 aaKnown RBP18.12■□□□□ 0.49
SDC2-205ENST00000520233 BBS5Q8N3I7 341 aa18.12■□□□□ 0.49
SDC2-205ENST00000520233 ZNF513Q8N8E2 541 aaPredicted RBP18.12■□□□□ 0.49
SDC2-205ENST00000520233 ATL2Q8NHH9 583 aa18.12■□□□□ 0.49
SDC2-205ENST00000520233 ISG20Q96AZ6 181 aaKnown RBP18.12■□□□□ 0.49
SDC2-205ENST00000520233 VAT1Q99536 393 aa18.12■□□□□ 0.49
SDC2-205ENST00000520233 IL12RB2Q99665 862 aa18.12■□□□□ 0.49
SDC2-205ENST00000520233 TMEM121Q9BTD3 319 aa18.12■□□□□ 0.49
SDC2-205ENST00000520233 CEP44Q9C0F1 390 aa18.12■□□□□ 0.49
SDC2-205ENST00000520233 SEPT10Q9P0V9 454 aa18.12■□□□□ 0.49
SDC2-205ENST00000520233 AMACRQ9UHK6 382 aa18.12■□□□□ 0.49
SDC2-205ENST00000520233 SLC8A2Q9UPR5 921 aa18.12■□□□□ 0.49
SDC2-205ENST00000520233 K7ERQ8 282 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 SMAD6O43541 496 aaKnown RBP18.11■□□□□ 0.49
SDC2-205ENST00000520233 STK10O94804 968 aaKnown RBP18.11■□□□□ 0.49
SDC2-205ENST00000520233 JCHAINP01591 159 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 CHRNB1P11230 501 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 PTPN3P26045 913 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 TIE1P35590 1138 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 MMP13P45452 471 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 KCNJ1P48048 391 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 SEC13P55735 322 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 LMNB2Q03252 620 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 WASHC5Q12768 1159 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 ZBTB17Q13105 803 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 ENPP2Q13822 863 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 LRRC32Q14392 662 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 FNDC3BQ53EP0 1204 aaKnown RBP18.11■□□□□ 0.49
SDC2-205ENST00000520233 TTC27Q6P3X3 843 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 SYNPOQ8N3V7 929 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 CEP112Q8N8E3 955 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 MNS1Q8NEH6 495 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 RTP4Q96DX8 246 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 RUNDC3BQ96NL0 473 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 PSKH2Q96QS6 385 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 CINPQ9BW66 212 aaPredicted RBP18.11■□□□□ 0.49
SDC2-205ENST00000520233 OSBPL6Q9BZF3 934 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 TMEM245Q9H330 911 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 L2HGDHQ9H9P8 463 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 TBC1D17Q9HA65 648 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 RBM12Q9NTZ6 932 aaKnown RBP18.11■□□□□ 0.49
SDC2-205ENST00000520233 RBM22Q9NW64 420 aaKnown RBP eCLIP18.11■□□□□ 0.49
SDC2-205ENST00000520233 SEPT3Q9UH03 358 aa18.11■□□□□ 0.49
SDC2-205ENST00000520233 FEZ2Q9UHY8 353 aaPredicted RBP18.11■□□□□ 0.49
SDC2-205ENST00000520233 FCF1Q9Y324 198 aaKnown RBP18.11■□□□□ 0.49
SDC2-205ENST00000520233 ANTXRLA6NF34 631 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 C5orf60A6NFR6 353 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 FAM170BA6NMN3 283 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 TTC34A8MYJ7 566 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 RNF103O00237 685 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 NEBLO76041 1014 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 ALADP13716 330 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 HSPA9P38646 679 aaKnown RBP18.1■□□□□ 0.49
SDC2-205ENST00000520233 ZNF235Q14590 738 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 UBXN2BQ14CS0 331 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 DLG2Q15700 870 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 ACCSLQ4AC99 568 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 HSF5Q4G112 596 aaPredicted RBP18.1■□□□□ 0.49
SDC2-205ENST00000520233 TEX44Q53QW1 395 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 C22orf39Q6P5X5 142 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 TRMT11Q7Z4G4 463 aaKnown RBP18.1■□□□□ 0.49
SDC2-205ENST00000520233 CCDC105Q8IYK2 499 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 ALLCQ8N6M5 410 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 FAM71DQ8N9W8 422 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 USP33Q8TEY7 942 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 FRS2Q8WU20 508 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 CCDC114Q96M63 670 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 ACOX2Q99424 681 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 DDX47Q9H0S4 455 aaKnown RBP18.1■□□□□ 0.49
SDC2-205ENST00000520233 LMAN1LQ9HAT1 526 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 HAUS2Q9NVX0 235 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 LHX3Q9UBR4 397 aa18.1■□□□□ 0.49
SDC2-205ENST00000520233 MTF2Q9Y483 593 aaPredicted RBP18.1■□□□□ 0.49
SDC2-205ENST00000520233 SGK1O00141 431 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 RNF40O75150 1001 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 ZNF821O75541 412 aaPredicted RBP18.09■□□□□ 0.49
SDC2-205ENST00000520233 IL12RB1P42701 662 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 GDF10P55107 478 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 RHOAP61586 193 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 C2orf54Q08AI8 447 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 FZD5Q13467 585 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 C2orf27AQ580R0 203 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 SERPINA13PQ6UXR4 307 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 TRIM67Q6ZTA4 783 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 KLHL7Q8IXQ5 586 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 PLPP6Q8IY26 295 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 CHPFQ8IZ52 775 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 ZNF567Q8N184 647 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 PCDH20Q8N6Y1 951 aaKnown RBP18.09■□□□□ 0.49
SDC2-205ENST00000520233 CNTD1Q8N815 330 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 IL17RCQ8NAC3 791 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 GRK7Q8WTQ7 553 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 SLCO2A1Q92959 643 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 ZNF419Q96HQ0 510 aaPredicted RBP18.09■□□□□ 0.49
SDC2-205ENST00000520233 TEKT5Q96M29 485 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 FOXQ1Q9C009 403 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 NT5MQ9NPB1 228 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 CACNA2D2Q9NY47 1150 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 SUN2Q9UH99 717 aa18.09■□□□□ 0.49
SDC2-205ENST00000520233 PCYOX1Q9UHG3 505 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms