RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 DUOXA1Q1HG43 343 aa18.78■□□□□ 0.6
SREK1-207ENST00000520058 SMTNL2Q2TAL5 461 aa18.78■□□□□ 0.6
SREK1-207ENST00000520058 KCNT1Q5JUK3 1230 aa18.78■□□□□ 0.6
SREK1-207ENST00000520058 ARTNQ5T4W7 220 aa18.78■□□□□ 0.6
SREK1-207ENST00000520058 HDDC3Q8N4P3 179 aa18.78■□□□□ 0.6
SREK1-207ENST00000520058 TMIEQ8NEW7 156 aa18.78■□□□□ 0.6
SREK1-207ENST00000520058 SLC35G2Q8TBE7 412 aa18.78■□□□□ 0.6
SREK1-207ENST00000520058 PIP4K2CQ8TBX8 421 aa18.78■□□□□ 0.6
SREK1-207ENST00000520058 RFFLQ8WZ73 363 aa18.78■□□□□ 0.6
SREK1-207ENST00000520058 PACSIN1Q9BY11 444 aa18.78■□□□□ 0.6
SREK1-207ENST00000520058 PARD6AQ9NPB6 346 aa18.78■□□□□ 0.6
SREK1-207ENST00000520058 CD93Q9NPY3 652 aa18.78■□□□□ 0.6
SREK1-207ENST00000520058 IMPACTQ9P2X3 320 aa18.78■□□□□ 0.6
SREK1-207ENST00000520058 IL36AQ9UHA7 158 aa18.78■□□□□ 0.6
SREK1-207ENST00000520058 PILRBQ9UKJ0 227 aa18.78■□□□□ 0.6
SREK1-207ENST00000520058 ADAMTS9Q9P2N4 1935 aa18.78■□□□□ 0.6
SREK1-207ENST00000520058 WDR87Q6ZQQ6 2873 aa18.78■□□□□ 0.6
SREK1-207ENST00000520058 SLC7A4O43246 635 aa18.77■□□□□ 0.6
SREK1-207ENST00000520058 RARAP10276 462 aa18.77■□□□□ 0.6
SREK1-207ENST00000520058 ERCC2P18074 760 aa18.77■□□□□ 0.6
SREK1-207ENST00000520058 ITPKAP23677 461 aa18.77■□□□□ 0.6
SREK1-207ENST00000520058 ACSL1P33121 698 aa18.77■□□□□ 0.6
SREK1-207ENST00000520058 SERPINB6P35237 376 aa18.77■□□□□ 0.6
SREK1-207ENST00000520058 CCDC6Q16204 474 aa18.77■□□□□ 0.6
SREK1-207ENST00000520058 INO80DQ53TQ3 878 aaPredicted RBP18.77■□□□□ 0.6
SREK1-207ENST00000520058 ODF2Q5BJF6 829 aa18.77■□□□□ 0.6
SREK1-207ENST00000520058 CARD16Q5EG05 197 aa18.77■□□□□ 0.6
SREK1-207ENST00000520058 DCAF12L1Q5VU92 463 aa18.77■□□□□ 0.6
SREK1-207ENST00000520058 TMCO3Q6UWJ1 677 aa18.77■□□□□ 0.6
SREK1-207ENST00000520058 PLPP6Q8IY26 295 aa18.77■□□□□ 0.6
SREK1-207ENST00000520058 RYBPQ8N488 228 aaPredicted RBP18.77■□□□□ 0.6
SREK1-207ENST00000520058 SNX19Q92543 992 aa18.77■□□□□ 0.6
SREK1-207ENST00000520058 RCOR3Q9P2K3 495 aaPredicted RBP18.77■□□□□ 0.6
SREK1-207ENST00000520058 EVLQ9UI08 416 aaPredicted RBP18.77■□□□□ 0.6
SREK1-207ENST00000520058 CDV3Q9UKY7 258 aaKnown RBP18.77■□□□□ 0.6
SREK1-207ENST00000520058 PPM1HQ9ULR3 514 aa18.77■□□□□ 0.6
SREK1-207ENST00000520058 ANKRD36A6QL64 1941 aa18.76■□□□□ 0.59
SREK1-207ENST00000520058 K7ERQ8 282 aa18.76■□□□□ 0.59
SREK1-207ENST00000520058 KPNA3O00505 521 aaPredicted RBP18.76■□□□□ 0.59
SREK1-207ENST00000520058 SMAD6O43541 496 aaKnown RBP18.76■□□□□ 0.59
SREK1-207ENST00000520058 CFIP05156 583 aa18.76■□□□□ 0.59
SREK1-207ENST00000520058 TGM1P22735 817 aa18.76■□□□□ 0.59
SREK1-207ENST00000520058 SERINC3Q13530 473 aa18.76■□□□□ 0.59
SREK1-207ENST00000520058 MESDQ14696 234 aa18.76■□□□□ 0.59
SREK1-207ENST00000520058 TRIM61Q5EBN2 209 aa18.76■□□□□ 0.59
SREK1-207ENST00000520058 DAB2IPQ5VWQ8 1189 aa18.76■□□□□ 0.59
SREK1-207ENST00000520058 SLC41A1Q8IVJ1 513 aa18.76■□□□□ 0.59
SREK1-207ENST00000520058 KCTD6Q8NC69 237 aa18.76■□□□□ 0.59
SREK1-207ENST00000520058 OR2A12Q8NGT7 310 aa18.76■□□□□ 0.59
SREK1-207ENST00000520058 OR14C36Q8NHC7 312 aa18.76■□□□□ 0.59
SREK1-207ENST00000520058 NETO1Q8TDF5 533 aa18.76■□□□□ 0.59
SREK1-207ENST00000520058 LRIG1Q96JA1 1093 aa18.76■□□□□ 0.59
SREK1-207ENST00000520058 HEPHQ9BQS7 1158 aa18.76■□□□□ 0.59
SREK1-207ENST00000520058 TNKS2Q9H2K2 1166 aa18.76■□□□□ 0.59
SREK1-207ENST00000520058 KDM4CQ9H3R0 1056 aa18.76■□□□□ 0.59
SREK1-207ENST00000520058 SP110Q9HB58 689 aa18.76■□□□□ 0.59
SREK1-207ENST00000520058 CWC15Q9P013 229 aaKnown RBP18.76■□□□□ 0.59
SREK1-207ENST00000520058 FAM47DPA6NHR8 397 aa18.75■□□□□ 0.59
SREK1-207ENST00000520058 IGSF6O95976 241 aa18.75■□□□□ 0.59
SREK1-207ENST00000520058 GSRP00390 522 aa18.75■□□□□ 0.59
SREK1-207ENST00000520058 SYPP08247 313 aa18.75■□□□□ 0.59
SREK1-207ENST00000520058 IL1R2P27930 398 aa18.75■□□□□ 0.59
SREK1-207ENST00000520058 CDC25BP30305 580 aa18.75■□□□□ 0.59
SREK1-207ENST00000520058 GJC1P36383 396 aa18.75■□□□□ 0.59
SREK1-207ENST00000520058 NOP2P46087 812 aaKnown RBP18.75■□□□□ 0.59
SREK1-207ENST00000520058 ATXN3P54252 364 aaPredicted RBP18.75■□□□□ 0.59
SREK1-207ENST00000520058 CDH6P55285 790 aa18.75■□□□□ 0.59
SREK1-207ENST00000520058 SLC25A11Q02978 314 aaKnown RBP18.75■□□□□ 0.59
SREK1-207ENST00000520058 PDK2Q15119 407 aa18.75■□□□□ 0.59
SREK1-207ENST00000520058 SF3A2Q15428 464 aaKnown RBP18.75■□□□□ 0.59
SREK1-207ENST00000520058 PEAR1Q5VY43 1037 aaPredicted RBP18.75■□□□□ 0.59
SREK1-207ENST00000520058 SLC23A3Q6PIS1 610 aa18.75■□□□□ 0.59
SREK1-207ENST00000520058 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.75■□□□□ 0.59
SREK1-207ENST00000520058 CYP4V2Q6ZWL3 525 aaPredicted RBP18.75■□□□□ 0.59
SREK1-207ENST00000520058 POLNQ7Z5Q5 900 aa18.75■□□□□ 0.59
SREK1-207ENST00000520058 TXLNBQ8N3L3 684 aa18.75■□□□□ 0.59
SREK1-207ENST00000520058 OR2AP1Q8NGE2 309 aa18.75■□□□□ 0.59
SREK1-207ENST00000520058 OR2T34Q8NGX1 318 aa18.75■□□□□ 0.59
SREK1-207ENST00000520058 HMCESQ96FZ2 354 aa18.75■□□□□ 0.59
SREK1-207ENST00000520058 CALR3Q96L12 384 aaKnown RBP18.75■□□□□ 0.59
SREK1-207ENST00000520058 GDAP1L1Q96MZ0 367 aa18.75■□□□□ 0.59
SREK1-207ENST00000520058 MIR1-1HGQ9H1L0 117 aa18.75■□□□□ 0.59
SREK1-207ENST00000520058 NEUROG2Q9H2A3 272 aa18.75■□□□□ 0.59
SREK1-207ENST00000520058 OSGEPQ9NPF4 335 aa18.75■□□□□ 0.59
SREK1-207ENST00000520058 HECAQ9UBI9 543 aaPredicted RBP18.75■□□□□ 0.59
SREK1-207ENST00000520058 UBA2Q9UBT2 640 aaPredicted RBP18.75■□□□□ 0.59
SREK1-207ENST00000520058 SLC6A14Q9UN76 642 aa18.75■□□□□ 0.59
SREK1-207ENST00000520058 FCF1Q9Y324 198 aaKnown RBP18.75■□□□□ 0.59
SREK1-207ENST00000520058 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.75■□□□□ 0.59
SREK1-207ENST00000520058 FRYLO94915 3013 aa18.75■□□□□ 0.59
SREK1-207ENST00000520058 ATXN2Q99700 1313 aaKnown RBP18.74■□□□□ 0.59
SREK1-207ENST00000520058 TBC1D3DA0A087WVF3 549 aa18.74■□□□□ 0.59
SREK1-207ENST00000520058 TBC1D3IA0A087WXS9 549 aa18.74■□□□□ 0.59
SREK1-207ENST00000520058 TBC1D3EA0A087X179 549 aa18.74■□□□□ 0.59
SREK1-207ENST00000520058 TBC1D3KA0A087X1G2 549 aa18.74■□□□□ 0.59
SREK1-207ENST00000520058 A0A1B0GTW7 788 aa18.74■□□□□ 0.59
SREK1-207ENST00000520058 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.74■□□□□ 0.59
SREK1-207ENST00000520058 TBC1D3FA6NER0 549 aaPredicted RBP18.74■□□□□ 0.59
SREK1-207ENST00000520058 TMEM110-MUSTN1A8MSY1 372 aa18.74■□□□□ 0.59
SREK1-207ENST00000520058 TBC1D3LB9A6J9 549 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms