RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 C1orf228Q6PIY5 440 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 DLK2Q6UY11 383 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 CDHR3Q6ZTQ4 885 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 BEND5Q7L4P6 421 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 ACOT1Q86TX2 421 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 PNMA8AQ86V59 439 aaPredicted RBP5.18□□□□□ -1.58
SDC2-204ENST00000519914 ZC3H18Q86VM9 953 aaKnown RBP5.18□□□□□ -1.58
SDC2-204ENST00000519914 SCML4Q8N228 414 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 NME8Q8N427 588 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 KIF2BQ8N4N8 673 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 C7orf31Q8N865 590 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 C12orf29Q8N999 325 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 FAM13CQ8NE31 585 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 OR6Y1Q8NGX8 325 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 RFWD2Q8NHY2 731 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 LZICQ8WZA0 190 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 MISP3Q96FF7 219 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 STAMBPL1Q96FJ0 436 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 NSL1Q96IY1 281 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 MAML3Q96JK9 1138 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 ZNF668Q96K58 619 aaPredicted RBP5.18□□□□□ -1.58
SDC2-204ENST00000519914 SRPK1Q96SB4 655 aaKnown RBP5.18□□□□□ -1.58
SDC2-204ENST00000519914 NPY6RQ99463 290 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 DUSP16Q9BY84 665 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 RAB6CQ9H0N0 254 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 FAM96AQ9H5X1 160 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 SNTG2Q9NY99 539 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 RRN3Q9NYV6 651 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.18□□□□□ -1.58
SDC2-204ENST00000519914 DTLQ9NZJ0 730 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 TUBGCP4Q9UGJ1 667 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 GPN3Q9UHW5 284 aaPredicted RBP5.18□□□□□ -1.58
SDC2-204ENST00000519914 GGT7Q9UJ14 662 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 ZFP69BQ9UJL9 534 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 GJD2Q9UKL4 321 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 ADAM28Q9UKQ2 775 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 GNEQ9Y223 722 aaKnown RBP5.18□□□□□ -1.58
SDC2-204ENST00000519914 Q9Y3F1 56 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 SNX9Q9Y5X1 595 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 IKBKGQ9Y6K9 419 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 NUMBLQ9Y6R0 609 aa5.18□□□□□ -1.58
SDC2-204ENST00000519914 SMIM28A0A1B0GU29 152 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.17□□□□□ -1.58
SDC2-204ENST00000519914 ERI2A8K979 691 aaKnown RBP5.17□□□□□ -1.58
SDC2-204ENST00000519914 A8MXQ7 604 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 KPNA7A9QM74 516 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 BTBD19C9JJ37 291 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 F8W8V4 182 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 CACNG3O60359 315 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 MAGEC1O60732 1142 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 RECQL4O94761 1208 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 HAUS5O94927 633 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 FBXO21O94952 628 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 METTL18O95568 372 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 BPGMP07738 259 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 GSTP1P09211 210 aaKnown RBP5.17□□□□□ -1.58
SDC2-204ENST00000519914 ZNF286BP0CG31 522 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 CSH1P0DML2 217 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 CSH2P0DML3 217 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 SMIM10L2AP0DMW4 78 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 SMIM10L2BP0DMW5 78 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 RARBP10826 455 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 MYL4P12829 197 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 PGAM1P18669 254 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 BGNP21810 368 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 PAX7P23759 505 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 PAX3P23760 479 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 YY1P25490 414 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 DNAJB1P25685 340 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 EPHX2P34913 555 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 GNL1P36915 607 aaPredicted RBP5.17□□□□□ -1.58
SDC2-204ENST00000519914 RGS7P49802 495 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 CSRP3P50461 194 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 GTF2A2P52657 109 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 FCGRTP55899 365 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 GBE1Q04446 702 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 PRKCQQ04759 706 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 DPYSQ14117 519 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 GRM2Q14416 872 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 R3HDM1Q15032 1099 aaKnown RBP5.17□□□□□ -1.58
SDC2-204ENST00000519914 PDK1Q15118 436 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 CDO1Q16878 200 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 HSF5Q4G112 596 aaPredicted RBP5.17□□□□□ -1.58
SDC2-204ENST00000519914 RAB41Q5JT25 222 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 GJC2Q5T442 439 aaPredicted RBP5.17□□□□□ -1.58
SDC2-204ENST00000519914 HEATR6Q6AI08 1181 aaKnown RBP5.17□□□□□ -1.58
SDC2-204ENST00000519914 KCNT2Q6UVM3 1135 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 C4orf50Q6ZRC1 276 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 MOB2Q70IA6 237 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 CATSPER4Q7RTX7 472 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 GPR142Q7Z601 462 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 PLEKHH3Q7Z736 793 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 MTDHQ86UE4 582 aaKnown RBP5.17□□□□□ -1.58
SDC2-204ENST00000519914 MFN1Q8IWA4 741 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.17□□□□□ -1.58
SDC2-204ENST00000519914 LSM14AQ8ND56 463 aaKnown RBP5.17□□□□□ -1.58
SDC2-204ENST00000519914 OR6J1Q8NGC5 347 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 SLC7A14Q8TBB6 771 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 CCDC110Q8TBZ0 833 aa5.17□□□□□ -1.58
SDC2-204ENST00000519914 ZNF483Q8TF39 744 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms