RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 SIGLEC14Q08ET2 396 aa14.4□□□□□ -0.1
SDC2-203ENST00000519587 LBRQ14739 615 aaKnown RBP14.4□□□□□ -0.1
SDC2-203ENST00000519587 OASLQ15646 514 aaKnown RBP14.4□□□□□ -0.1
SDC2-203ENST00000519587 HSF5Q4G112 596 aaPredicted RBP14.4□□□□□ -0.1
SDC2-203ENST00000519587 INO80DQ53TQ3 878 aaPredicted RBP14.4□□□□□ -0.1
SDC2-203ENST00000519587 TMEM215Q68D42 235 aa14.4□□□□□ -0.1
SDC2-203ENST00000519587 SERPINA13PQ6UXR4 307 aa14.4□□□□□ -0.1
SDC2-203ENST00000519587 LINGO4Q6UY18 593 aa14.4□□□□□ -0.1
SDC2-203ENST00000519587 GSTA5Q7RTV2 222 aa14.4□□□□□ -0.1
SDC2-203ENST00000519587 ZNF513Q8N8E2 541 aaPredicted RBP14.4□□□□□ -0.1
SDC2-203ENST00000519587 CEP112Q8N8E3 955 aa14.4□□□□□ -0.1
SDC2-203ENST00000519587 CCDC89Q8N998 374 aa14.4□□□□□ -0.1
SDC2-203ENST00000519587 TRHDEQ9UKU6 1024 aa14.4□□□□□ -0.1
SDC2-203ENST00000519587 DRG1Q9Y295 367 aaKnown RBP14.4□□□□□ -0.1
SDC2-203ENST00000519587 STARD13Q9Y3M8 1113 aa14.4□□□□□ -0.1
SDC2-203ENST00000519587 KANSL1LA0AUZ9 987 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 CTAGE15A4D2H0 777 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 KCNK1O00180 336 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 PDE2AO00408 941 aaPredicted RBP14.39□□□□□ -0.11
SDC2-203ENST00000519587 OPHN1O60890 802 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 TMCC1O94876 653 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 EGFP01133 1207 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 CTAGE8P0CG41 777 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 HNRNPLP14866 589 aaKnown RBP eCLIP14.39□□□□□ -0.117e-7■■□□□ 12.4
SDC2-203ENST00000519587 RECQLP46063 649 aaPredicted RBP14.39□□□□□ -0.11
SDC2-203ENST00000519587 NUMBP49757 651 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 STK19P49842 368 aaPredicted RBP14.39□□□□□ -0.11
SDC2-203ENST00000519587 RHOAP61586 193 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 MRPS21P82921 87 aaKnown RBP14.39□□□□□ -0.11
SDC2-203ENST00000519587 MESP2Q0VG99 397 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 CCINQ13939 588 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 UBXN2BQ14CS0 331 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 ACCSLQ4AC99 568 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 IER5LQ5T953 404 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 ITPRIPL1Q6GPH6 555 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 SDE2Q6IQ49 451 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 C22orf39Q6P5X5 142 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 CCDC137Q6PK04 289 aaKnown RBP14.39□□□□□ -0.11
SDC2-203ENST00000519587 CTAGE6Q86UF2 777 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 CTAGE4Q8IX94 777 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 CCDC105Q8IYK2 499 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 SYNPOQ8N3V7 929 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 SH2D3CQ8N5H7 860 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 PCDH20Q8N6Y1 951 aaKnown RBP14.39□□□□□ -0.11
SDC2-203ENST00000519587 SPATA4Q8NEY3 305 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 CYB5D2Q8WUJ1 264 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 MAML1Q92585 1016 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 ISG20Q96AZ6 181 aaKnown RBP14.39□□□□□ -0.11
SDC2-203ENST00000519587 TMEM121Q9BTD3 319 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 MFSD1Q9H3U5 465 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 TBC1D17Q9HA65 648 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 LTB4R2Q9NPC1 389 aa14.39□□□□□ -0.11
SDC2-203ENST00000519587 THAP10Q9P2Z0 257 aaPredicted RBP14.39□□□□□ -0.11
SDC2-203ENST00000519587 MYO18AQ92614 2054 aaKnown RBP14.38□□□□□ -0.11
SDC2-203ENST00000519587 KRBA1A5PL33 1030 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 K7EQS6 105 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 ATP9BO43861 1147 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 ECEL1O95672 775 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 IGSF6O95976 241 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 SRCP12931 536 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 VAV1P15498 845 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 RBL1P28749 1068 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 COILP38432 576 aaPredicted RBP14.38□□□□□ -0.11
SDC2-203ENST00000519587 CTSOP43234 321 aaPredicted RBP14.38□□□□□ -0.11
SDC2-203ENST00000519587 MAPK8P45983 427 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 SEC13P55735 322 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 ZNF234Q14588 700 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 EGFLAMQ63HQ2 1017 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 C4orf22Q6V702 233 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 LEKR1Q6ZMV7 388 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 ARHGEF18Q6ZSZ5 1173 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 CHPFQ8IZ52 775 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 FAM71DQ8N9W8 422 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 ATL2Q8NHH9 583 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 SORCS1Q8WY21 1168 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 EDAQ92838 391 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 RPL10LQ96L21 214 aaKnown RBP14.38□□□□□ -0.11
SDC2-203ENST00000519587 GDAP1L1Q96MZ0 367 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 PPP1R2P1Q96PQ5 205 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 PSKH2Q96QS6 385 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 OSBPL6Q9BZF3 934 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 POLR1EQ9GZS1 481 aaKnown RBP14.38□□□□□ -0.11
SDC2-203ENST00000519587 FBRSL1Q9HCM7 1045 aaKnown RBP14.38□□□□□ -0.11
SDC2-203ENST00000519587 RBM12Q9NTZ6 932 aaKnown RBP14.38□□□□□ -0.11
SDC2-203ENST00000519587 KLHL8Q9P2G9 620 aaPredicted RBP14.38□□□□□ -0.11
SDC2-203ENST00000519587 FARP1Q9Y4F1 1045 aaPredicted RBP14.38□□□□□ -0.11
SDC2-203ENST00000519587 TTLL3Q9Y4R7 772 aa14.38□□□□□ -0.11
SDC2-203ENST00000519587 EDDM13A0A1B0GTR0 161 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 STK25O00506 426 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 PEX11BO96011 259 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 GSRP00390 522 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 IFNB1P01574 187 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 JCHAINP01591 159 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 CD72P21854 359 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 PTPN3P26045 913 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 NTSR1P30989 418 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 TIE1P35590 1138 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 KIR2DL1P43626 348 aaPredicted RBP14.37□□□□□ -0.11
SDC2-203ENST00000519587 SNRPD1P62314 119 aaKnown RBP14.37□□□□□ -0.11
SDC2-203ENST00000519587 FOXK2Q01167 660 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms