RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 VPS36Q86VN1 386 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 OR6K2Q8NGY2 324 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 OR14C36Q8NHC7 312 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 GRIN3AQ8TCU5 1115 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 FAM131CQ96AQ9 280 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 TRIM11Q96F44 468 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 EPAS1Q99814 870 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 RTKNQ9BST9 563 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 NUSAP1Q9BXS6 441 aaKnown RBP13.58□□□□□ -0.24
VEGFA-219ENST00000518824 TM6SF2Q9BZW4 377 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 MAGEH1Q9H213 219 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 ZWILCHQ9H900 591 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 SGK2Q9HBY8 427 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 CWC15Q9P013 229 aaKnown RBP13.58□□□□□ -0.24
VEGFA-219ENST00000518824 ANAPC7Q9UJX3 599 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 SLC6A14Q9UN76 642 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 NCKAP1Q9Y2A7 1128 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 WASF2Q9Y6W5 498 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 TMEM131Q92545 1883 aa13.58□□□□□ -0.24
VEGFA-219ENST00000518824 EEF2KO00418 725 aaKnown RBP13.57□□□□□ -0.24
VEGFA-219ENST00000518824 KDELR3O43731 214 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 PRPSAP2O60256 369 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 RARAP10276 462 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 DNA2P51530 1060 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 AIF1P55008 147 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 SLC25A11Q02978 314 aaKnown RBP13.57□□□□□ -0.24
VEGFA-219ENST00000518824 TRIM14Q14142 442 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 SLC18A3Q16572 532 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 UAP1L1Q3KQV9 507 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 ATP13A4Q4VNC1 1196 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 PPP6R3Q5H9R7 873 aaPredicted RBP13.57□□□□□ -0.24
VEGFA-219ENST00000518824 WDR45BQ5MNZ6 344 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 SYCP2LQ5T4T6 812 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 ATXN7L2Q5T6C5 722 aaPredicted RBP13.57□□□□□ -0.24
VEGFA-219ENST00000518824 PIP5KL1Q5T9C9 394 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 AGBL4Q5VU57 503 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 ARHGAP36Q6ZRI8 547 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 ARHGAP12Q8IWW6 846 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 NPWQ8N729 165 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 GTPBP2Q9BX10 602 aaKnown RBP13.57□□□□□ -0.24
VEGFA-219ENST00000518824 TRIM5Q9C035 493 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 SLC39A8Q9C0K1 460 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 LRRC19Q9H756 370 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 IL21RQ9HBE5 538 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 MRPL47Q9HD33 250 aaKnown RBP13.57□□□□□ -0.24
VEGFA-219ENST00000518824 TMEM9BQ9NQ34 198 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 ETNK2Q9NVF9 386 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 SCML1Q9UN30 329 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 CACNA1EQ15878 2313 aa13.57□□□□□ -0.24
VEGFA-219ENST00000518824 TP53BP1Q12888 1972 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-219ENST00000518824 A0A1B0GTW7 788 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 A0A1B0GVT2 93 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 SSU72P8A0A1W2PR75 194 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 J3KR12 359 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 ARHGAP33O14559 1287 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 GIPC1O14908 333 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 ALOX15BO15296 676 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 BCAT2O15382 392 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-219ENST00000518824 BUB1O43683 1085 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 FOXD2O60548 495 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-219ENST00000518824 LEFTY1O75610 366 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 ERCC2P18074 760 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 AMPD1P23109 780 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 HOXD12P35452 270 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 CSNK1EP49674 416 aaKnown RBP13.56□□□□□ -0.24
VEGFA-219ENST00000518824 CLCN6P51797 869 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 CCNHP51946 323 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-219ENST00000518824 TAS2R40P59535 323 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 GRIK2Q13002 908 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 SERINC3Q13530 473 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 CARD16Q5EG05 197 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 RETSATQ6NUM9 610 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 RFX8Q6ZV50 586 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 ZNF354CQ86Y25 554 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 UMODL1-AS1Q8N2C9 162 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 TC2NQ8N9U0 490 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 ZNF564Q8TBZ8 553 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-219ENST00000518824 HSPH1Q92598 858 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 SLC6A18Q96N87 628 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 CATSPERBQ9H7T0 1116 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 NHEJ1Q9H9Q4 299 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-219ENST00000518824 TM9SF3Q9HD45 589 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 OSGEPQ9NPF4 335 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 FZD4Q9ULV1 537 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 SPTBN2O15020 2390 aa13.56□□□□□ -0.24
VEGFA-219ENST00000518824 KPNA3O00505 521 aaPredicted RBP13.55□□□□□ -0.24
VEGFA-219ENST00000518824 KCNK3O14649 394 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 INSIG1O15503 277 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 PLRG1O43660 514 aaKnown RBP13.55□□□□□ -0.24
VEGFA-219ENST00000518824 TMCC1O94876 653 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 WNT1P04628 370 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 CD48P09326 243 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 KCNA4P22459 653 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 MAT2AP31153 395 aaKnown RBP13.55□□□□□ -0.24
VEGFA-219ENST00000518824 PCK1P35558 622 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 ZNF75DP51815 510 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 SLC20A2Q08357 652 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 MMRN1Q13201 1228 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 DPYSQ14117 519 aa13.55□□□□□ -0.24
VEGFA-219ENST00000518824 PIGHQ14442 188 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms