RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 CCDC142Q17RM4 750 aa4.82□□□□□ -1.64
SQLE-202ENST00000518604 SMTNL2Q2TAL5 461 aa4.82□□□□□ -1.64
SQLE-202ENST00000518604 PRICKLE4Q2TBC4 344 aa4.82□□□□□ -1.64
SQLE-202ENST00000518604 C6orf10Q5SRN2 563 aa4.82□□□□□ -1.64
SQLE-202ENST00000518604 NCAPH2Q6IBW4 605 aa4.82□□□□□ -1.64
SQLE-202ENST00000518604 IL20RBQ6UXL0 311 aa4.82□□□□□ -1.64
SQLE-202ENST00000518604 PRSS45Q7RTY3 260 aa4.82□□□□□ -1.64
SQLE-202ENST00000518604 TMC8Q8IU68 726 aa4.82□□□□□ -1.64
SQLE-202ENST00000518604 CPXM2Q8N436 756 aa4.82□□□□□ -1.64
SQLE-202ENST00000518604 ZMIZ2Q8NF64 920 aa4.82□□□□□ -1.64
SQLE-202ENST00000518604 TBC1D22AQ8WUA7 517 aa4.82□□□□□ -1.64
SQLE-202ENST00000518604 RUFY2Q8WXA3 655 aa4.82□□□□□ -1.64
SQLE-202ENST00000518604 ZNF333Q96JL9 665 aa4.82□□□□□ -1.64
SQLE-202ENST00000518604 ZHX3Q9H4I2 956 aa4.82□□□□□ -1.64
SQLE-202ENST00000518604 VEZTQ9HBM0 779 aa4.82□□□□□ -1.64
SQLE-202ENST00000518604 PNRC2Q9NPJ4 139 aaKnown RBP4.82□□□□□ -1.64
SQLE-202ENST00000518604 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.82□□□□□ -1.64
SQLE-202ENST00000518604 ARHGEF17Q96PE2 2063 aaPredicted RBP4.81□□□□□ -1.64
SQLE-202ENST00000518604 GAGE12JA6NER3 117 aa4.81□□□□□ -1.64
SQLE-202ENST00000518604 TNPO2O14787 897 aaKnown RBP4.81□□□□□ -1.64
SQLE-202ENST00000518604 MYZAPP0CAP1 466 aa4.81□□□□□ -1.64
SQLE-202ENST00000518604 CASP6P55212 293 aa4.81□□□□□ -1.64
SQLE-202ENST00000518604 MRPS21P82921 87 aaKnown RBP4.81□□□□□ -1.64
SQLE-202ENST00000518604 MTX1Q13505 466 aa4.81□□□□□ -1.64
SQLE-202ENST00000518604 SLC4A8Q2Y0W8 1093 aa4.81□□□□□ -1.64
SQLE-202ENST00000518604 Q4G0T1 1027 aa4.81□□□□□ -1.64
SQLE-202ENST00000518604 PXDC1Q5TGL8 231 aa4.81□□□□□ -1.64
SQLE-202ENST00000518604 TBC1D9BQ66K14 1250 aa4.81□□□□□ -1.64
SQLE-202ENST00000518604 INO80CQ6PI98 192 aaPredicted RBP4.81□□□□□ -1.64
SQLE-202ENST00000518604 SLC22A25Q6T423 547 aa4.81□□□□□ -1.64
SQLE-202ENST00000518604 C17orf99Q6UX52 265 aa4.81□□□□□ -1.64
SQLE-202ENST00000518604 MRPL10Q7Z7H8 261 aaKnown RBP4.81□□□□□ -1.64
SQLE-202ENST00000518604 MON1AQ86VX9 555 aa4.81□□□□□ -1.64
SQLE-202ENST00000518604 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.81□□□□□ -1.64
SQLE-202ENST00000518604 C11orf65Q8NCR3 313 aa4.81□□□□□ -1.64
SQLE-202ENST00000518604 DNAAF1Q8NEP3 725 aa4.81□□□□□ -1.64
SQLE-202ENST00000518604 NFKBIDQ8NI38 313 aa4.81□□□□□ -1.64
SQLE-202ENST00000518604 TMEM170AQ8WVE7 144 aa4.81□□□□□ -1.64
SQLE-202ENST00000518604 RPL36ALQ969Q0 106 aaKnown RBP4.81□□□□□ -1.64
SQLE-202ENST00000518604 ZUFSPQ96AP4 578 aa4.81□□□□□ -1.64
SQLE-202ENST00000518604 IL1RAPL1Q9NZN1 696 aa4.81□□□□□ -1.64
SQLE-202ENST00000518604 A0A0G2JK05 382 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 ARHGAP10A1A4S6 786 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 TARSL2A2RTX5 802 aaKnown RBP4.8□□□□□ -1.64
SQLE-202ENST00000518604 B4E171 279 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 ZNF814B7Z6K7 855 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 FAM157AC9JC47 383 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 CEP104O60308 925 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 TMEM63AO94886 807 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 F9P00740 461 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 ADAP00813 363 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 KLKB1P03952 638 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 URODP06132 367 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 UNGP13051 313 aaPredicted RBP4.8□□□□□ -1.64
SQLE-202ENST00000518604 COX7A2P14406 83 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 ABCD3P28288 659 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 TSPAN7P41732 249 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 CCT4P50991 539 aaKnown RBP4.8□□□□□ -1.64
SQLE-202ENST00000518604 PTP4A2Q12974 167 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 PKP1Q13835 747 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 SYTL3Q4VX76 610 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 ENTPD8Q5MY95 495 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 FAAH2Q6GMR7 532 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 B4GALNT4Q76KP1 1039 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 RRM2BQ7LG56 351 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 PPHLN1Q8NEY8 458 aaKnown RBP4.8□□□□□ -1.64
SQLE-202ENST00000518604 DENND1AQ8TEH3 1009 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 EME1Q96AY2 570 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 MSI2Q96DH6 328 aaKnown RBP4.8□□□□□ -1.64
SQLE-202ENST00000518604 AAMDCQ9H7C9 122 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 SEMA4BQ9NPR2 832 aaPredicted RBP4.8□□□□□ -1.64
SQLE-202ENST00000518604 DECR2Q9NUI1 292 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 IRAK4Q9NWZ3 460 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 TRNAU1APQ9NX07 287 aaKnown RBP4.8□□□□□ -1.64
SQLE-202ENST00000518604 MSRB1Q9NZV6 116 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 NLKQ9UBE8 527 aa4.8□□□□□ -1.64
SQLE-202ENST00000518604 ITIH6Q6UXX5 1313 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 ADAM10O14672 748 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 ATG13O75143 517 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 MBD4O95243 580 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 IFNA2P01563 188 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 TMEM191BP0C7N4 346 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 ATP1A3P13637 1013 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 DPP6P42658 865 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 PTPN9P43378 593 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 ABCG1P45844 678 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 GPR12P47775 334 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 ME1P48163 572 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 ALDH7A1P49419 539 aaKnown RBP4.79□□□□□ -1.64
SQLE-202ENST00000518604 ARSFP54793 590 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 YWHAZP63104 245 aaKnown RBP4.79□□□□□ -1.64
SQLE-202ENST00000518604 EFNB1P98172 346 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 CYP4A11Q02928 519 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 RBMS2Q15434 407 aaKnown RBP4.79□□□□□ -1.64
SQLE-202ENST00000518604 TWIST1Q15672 202 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 INPP5JQ15735 1006 aaPredicted RBP4.79□□□□□ -1.64
SQLE-202ENST00000518604 FBXO43Q4G163 708 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 SHC4Q6S5L8 630 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 DSTYKQ6XUX3 929 aa4.79□□□□□ -1.64
SQLE-202ENST00000518604 RSRC2Q7L4I2 434 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms