RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 SPIDRQ14159 915 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 MEA1Q16626 185 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 COLEC12Q5KU26 742 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 FOXD4L5Q5VV16 416 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 OR6B2Q6IFH4 312 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 FBXL22Q6P050 247 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 LURAP1LQ8IV03 231 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 PPM1KQ8N3J5 372 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 ATP11CQ8NB49 1132 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 OR2A12Q8NGT7 310 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 STK32AQ8WU08 396 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 FOXD4L4Q8WXT5 416 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 SGF29Q96ES7 293 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 NT5C1BQ96P26 610 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 MED15Q96RN5 788 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 ZSWIM1Q9BR11 485 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 C2orf49Q9BVC5 232 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 BOCQ9BWV1 1114 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 SLC17A9Q9BYT1 436 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 MUC3BQ9H195 1237 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 FAM204AQ9H8W3 233 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 IPO11Q9UI26 975 aaKnown RBP11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 ACSL6Q9UKU0 697 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 ZFR2Q9UPR6 939 aaKnown RBP11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 BSNQ9UPA5 3926 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 TEX15Q9BXT5 2789 aa11.73□□□□□ -0.53
TRAPPC9-203ENST00000517667 TMX2-CTNND1H3BSU7 103 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 FPGTO14772 594 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 PLD2O14939 933 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 MUSKO15146 869 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 SUV39H1O43463 412 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 JUNDP17535 347 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 GPD2P43304 727 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 RECQLP46063 649 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 CLCN6P51797 869 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 NEK3P51956 506 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 PDX1P52945 283 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 CENPCQ03188 943 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 EIF4EBP2Q13542 120 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 PDE1CQ14123 709 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 DEFB133Q30KQ1 61 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 LINC00303Q3SY05 128 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 SEL1L3Q68CR1 1132 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 CRTC1Q6UUV9 634 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 SLC35C1Q96A29 364 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 FEM1CQ96JP0 617 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 BMFQ96LC9 184 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 TSG101Q99816 390 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 SEMA3CQ99985 751 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 THAP9Q9H5L6 903 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 WDR70Q9NW82 654 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 SPASTQ9UBP0 616 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 ARMCX3Q9UH62 379 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 IL36AQ9UHA7 158 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 TBC1D30Q9Y2I9 924 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 OR51B4Q9Y5P0 310 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 LRRK2Q5S007 2527 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 RP1P56715 2156 aa11.72□□□□□ -0.53
TRAPPC9-203ENST00000517667 PMS2P1A4D2B8 440 aa11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 POM121BA6NF01 834 aa11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 RNF225M0QZC1 329 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 AFPP02771 609 aaKnown RBP11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 SLC5A2P31639 672 aa11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 CDH4P55283 916 aa11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 CDK17Q00537 523 aa11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 FKBP3Q00688 224 aaKnown RBP11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 DNM1Q05193 864 aaKnown RBP11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 CETN1Q12798 172 aa11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 MAPK8IP2Q13387 824 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 AUHQ13825 339 aaKnown RBP11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 PERM1Q5SV97 790 aa11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 C14orf80Q86SX3 495 aa11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 ZSCAN1Q8NBB4 408 aa11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 OR52K2Q8NGK3 314 aa11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 GRIN3AQ8TCU5 1115 aa11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 LMX1AQ8TE12 382 aa11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 EXTL1Q92935 676 aa11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 CCDC34Q96HJ3 373 aa11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 TBATAQ96M53 351 aa11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 LENG8Q96PV6 779 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 CCDC3Q9BQI4 270 aa11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 SLC4A5Q9BY07 1137 aa11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 STRADBQ9C0K7 418 aa11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 DDIT4Q9NX09 232 aa11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 SEPT10Q9P0V9 454 aa11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 SEPT3Q9UH03 358 aa11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 VANGL2Q9ULK5 521 aa11.71□□□□□ -0.53
TRAPPC9-203ENST00000517667 SCN8AQ9UQD0 1980 aa11.7□□□□□ -0.54
TRAPPC9-203ENST00000517667 DOPEY2Q9Y3R5 2298 aa11.7□□□□□ -0.54
TRAPPC9-203ENST00000517667 FAM237AA0A1B0GTK4 181 aa11.7□□□□□ -0.54
TRAPPC9-203ENST00000517667 E5RJQ4 531 aa11.7□□□□□ -0.54
TRAPPC9-203ENST00000517667 LMO7DNF2Z398 122 aa11.7□□□□□ -0.54
TRAPPC9-203ENST00000517667 PMM2O15305 246 aa11.7□□□□□ -0.54
TRAPPC9-203ENST00000517667 EFSO43281 561 aa11.7□□□□□ -0.54
TRAPPC9-203ENST00000517667 MED7O43513 233 aa11.7□□□□□ -0.54
TRAPPC9-203ENST00000517667 AP1G1O43747 822 aa11.7□□□□□ -0.54
TRAPPC9-203ENST00000517667 PPFIA2O75334 1257 aa11.7□□□□□ -0.54
TRAPPC9-203ENST00000517667 PAK4O96013 591 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC9-203ENST00000517667 MT-CO1P00395 513 aa11.7□□□□□ -0.54
TRAPPC9-203ENST00000517667 GLI1P08151 1106 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms