RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 NPHS1O60500 1241 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 USP12O75317 370 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 ZMPSTE24O75844 475 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 F2P00734 622 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 AMHP03971 560 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 NFKB1P19838 968 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 GRIA4P48058 902 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 NDUFV1P49821 464 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 TKTL1P51854 596 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 GTF2A2P52657 109 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 THOP1P52888 689 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 POLE2P56282 527 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 ADAM17P78536 824 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 FOLH1Q04609 750 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 NME3Q13232 169 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 SLC12A1Q13621 1099 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 CYLC2Q14093 348 aaPredicted RBP6.77□□□□□ -1.32
CDH12-203ENST00000517378 GRM3Q14832 879 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 ARL13AQ5H913 290 aaPredicted RBP6.77□□□□□ -1.32
CDH12-203ENST00000517378 PM20D1Q6GTS8 502 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 ARPINQ7Z6K5 226 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 LINC00523Q86TU6 105 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 SNX32Q86XE0 403 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 DSELQ8IZU8 1212 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 CENPLQ8N0S6 344 aaPredicted RBP6.77□□□□□ -1.32
CDH12-203ENST00000517378 LSMEM2Q8N112 164 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 DNAAF3Q8N9W5 541 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 GPRC5AQ8NFJ5 357 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 ADCY4Q8NFM4 1077 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 ATXN7L3BQ96GX2 97 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 GPR78Q96P69 363 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 OSMRQ99650 979 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 CHRAC1Q9NRG0 131 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 MRGBPQ9NV56 204 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 CPSF2Q9P2I0 782 aaKnown RBP6.77□□□□□ -1.32
CDH12-203ENST00000517378 PPP1R1BQ9UD71 204 aaPredicted RBP6.77□□□□□ -1.32
CDH12-203ENST00000517378 NEU3Q9UQ49 428 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 SLC45A1Q9Y2W3 748 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 SHROOM3Q8TF72 1996 aa6.77□□□□□ -1.32
CDH12-203ENST00000517378 TANC1Q9C0D5 1861 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 E2F8A0AVK6 867 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 PDLIM1O00151 329 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 STRNO43815 780 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 BCAS2O75934 225 aaPredicted RBP6.77□□□□□ -1.33
CDH12-203ENST00000517378 DDHD2O94830 711 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 F9P00740 461 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 FAM200BP0CF97 657 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 TFEBP19484 476 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 NMBRP28336 390 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 CXCR3P49682 368 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 DNAJB13P59910 316 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 LSAMPQ13449 338 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 SNX17Q15036 470 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 UGP2Q16851 508 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 LRRC36Q1X8D7 754 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 ARL13BQ3SXY8 428 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 PPM1LQ5SGD2 360 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 RARS2Q5T160 578 aaKnown RBP6.77□□□□□ -1.33
CDH12-203ENST00000517378 KIAA0319Q5VV43 1072 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 LRRC8EQ6NSJ5 796 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 SCML4Q8N228 414 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 PELI3Q8N2H9 469 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 NAT14Q8WUY8 206 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 PTCD2Q8WV60 388 aaKnown RBP6.77□□□□□ -1.33
CDH12-203ENST00000517378 CDCA5Q96FF9 252 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 PPP1R10Q96QC0 940 aaKnown RBP6.77□□□□□ -1.33
CDH12-203ENST00000517378 ULBP1Q9BZM6 244 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 Q9H521 79 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 TASP1Q9H6P5 420 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 ZNF696Q9H7X3 374 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 VCX3AQ9NNX9 186 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 IARS2Q9NSE4 1012 aaKnown RBP6.77□□□□□ -1.33
CDH12-203ENST00000517378 CNOT11Q9UKZ1 510 aaKnown RBP6.77□□□□□ -1.33
CDH12-203ENST00000517378 CDYLQ9Y232 598 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 KLHL33A6NCF5 533 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 YJEFN3A6XGL0 299 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 HHLA1C9JL84 531 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 ACOT8O14734 319 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 DNAJA2O60884 412 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 PIGNO95427 931 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 SMIM10L2AP0DMW4 78 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 SMIM10L2BP0DMW5 78 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 CD1EP15812 388 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 GABRB3P28472 473 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 GJA5P36382 358 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 HSPA13P48723 471 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 IRF5Q13568 498 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 TLR1Q15399 786 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 SMAD1Q15797 465 aaKnown RBP6.77□□□□□ -1.33
CDH12-203ENST00000517378 TSTD2Q5T7W7 516 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 RASIP1Q5U651 963 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 ALDH16A1Q8IZ83 802 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 AHI1Q8N157 1196 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 SMG8Q8ND04 991 aaKnown RBP6.77□□□□□ -1.33
CDH12-203ENST00000517378 OR6J1Q8NGC5 347 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 TMEM40Q8WWA1 233 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 TOP1MTQ969P6 601 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 PRICKLE1Q96MT3 831 aaPredicted RBP6.77□□□□□ -1.33
CDH12-203ENST00000517378 EPAS1Q99814 870 aa6.77□□□□□ -1.33
CDH12-203ENST00000517378 COLEC11Q9BWP8 271 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms