RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 PRSS45Q7RTY3 260 aa3.55□□□□□ -1.84
RNU6-840P-201ENST00000517275 TADA2BQ86TJ2 420 aa3.55□□□□□ -1.84
RNU6-840P-201ENST00000517275 FAM160B2Q86V87 743 aa3.55□□□□□ -1.84
RNU6-840P-201ENST00000517275 KLBQ86Z14 1044 aa3.55□□□□□ -1.84
RNU6-840P-201ENST00000517275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.55□□□□□ -1.84
RNU6-840P-201ENST00000517275 FRMD1Q8N878 549 aa3.55□□□□□ -1.84
RNU6-840P-201ENST00000517275 HSPH1Q92598 858 aa3.55□□□□□ -1.84
RNU6-840P-201ENST00000517275 CELF1Q92879 486 aaKnown RBP3.55□□□□□ -1.84
RNU6-840P-201ENST00000517275 HS6ST2Q96MM7 605 aa3.55□□□□□ -1.84
RNU6-840P-201ENST00000517275 FIZ1Q96SL8 496 aa3.55□□□□□ -1.84
RNU6-840P-201ENST00000517275 ABHD14AQ9BUJ0 271 aa3.55□□□□□ -1.84
RNU6-840P-201ENST00000517275 GLIS2Q9BZE0 524 aaPredicted RBP3.55□□□□□ -1.84
RNU6-840P-201ENST00000517275 NUAK2Q9H093 628 aa3.55□□□□□ -1.84
RNU6-840P-201ENST00000517275 SH3GLB2Q9NR46 395 aa3.55□□□□□ -1.84
RNU6-840P-201ENST00000517275 ARL15Q9NXU5 204 aa3.55□□□□□ -1.84
RNU6-840P-201ENST00000517275 IL1RAPL1Q9NZN1 696 aa3.55□□□□□ -1.84
RNU6-840P-201ENST00000517275 ZNF70Q9UC06 446 aaPredicted RBP3.55□□□□□ -1.84
RNU6-840P-201ENST00000517275 CHORDC1Q9UHD1 332 aaPredicted RBP3.55□□□□□ -1.84
RNU6-840P-201ENST00000517275 INTS6Q9UL03 887 aaKnown RBP3.55□□□□□ -1.84
RNU6-840P-201ENST00000517275 CORO1CQ9ULV4 474 aaPredicted RBP3.55□□□□□ -1.84
RNU6-840P-201ENST00000517275 EPN1Q9Y6I3 576 aaPredicted RBP3.55□□□□□ -1.84
RNU6-840P-201ENST00000517275 CAPN7Q9Y6W3 813 aa3.55□□□□□ -1.84
RNU6-840P-201ENST00000517275 MST1RQ04912 1400 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 ZNF644Q9H582 1327 aaPredicted RBP3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 ARHGAP10A1A4S6 786 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 GLOD5A6NK44 160 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 MYO1GB0I1T2 1018 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 EBAG9O00559 213 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 UBE2CO00762 179 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 TP73O15350 636 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 STRNO43815 780 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 TACC1O75410 805 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 GJB3O75712 270 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 JTBO76095 146 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 PDE8BO95263 885 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 AKR1A1P14550 325 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 PTPN2P17706 415 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 NFKBIAP25963 317 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 CDAP32320 146 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 TTKP33981 857 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 PTGER1P34995 402 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 CENPAP49450 140 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 YWHAZP63104 245 aaKnown RBP3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 GOLGA8DPQ0D2H9 430 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 SLC14A1Q13336 389 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 FOXE3Q13461 319 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 IRF3Q14653 427 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 ZNF169Q14929 603 aaPredicted RBP3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 RNPS1Q15287 305 aaKnown RBP3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 ALDH1L2Q3SY69 923 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 ANXA2RQ3ZCQ2 193 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 KIAA1755Q5JYT7 1200 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 MFSD4BQ5TF39 518 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 NAA16Q6N069 864 aaPredicted RBP3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 HMBOX1Q6NT76 420 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 TMEM65Q6PI78 240 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 IL20RBQ6UXL0 311 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 TFAP2DQ7Z6R9 452 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 RHPN2Q8IUC4 686 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 PALM2Q8IXS6 379 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 LCORLQ8N3X6 602 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 SLC44A3Q8N4M1 653 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 FAM47BQ8NA70 645 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 SGCDQ92629 289 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 NELL1Q92832 810 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 CALML4Q96GE6 196 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 CLMNQ96JQ2 1002 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 C20orf173Q96LM9 149 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 H2AFJQ9BTM1 129 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 TEX12Q9BXU0 123 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 MRPL1Q9BYD6 325 aaKnown RBP3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 FBRSL1Q9HCM7 1045 aaKnown RBP3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 ASAH2Q9NR71 780 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 SUCLA2Q9P2R7 463 aaPredicted RBP3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 NOL7Q9UMY1 257 aaKnown RBP3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 A4GNTQ9UNA3 340 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 ICKQ9UPZ9 632 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 ZNF711Q9Y462 761 aa3.54□□□□□ -1.84
RNU6-840P-201ENST00000517275 COL4A3Q01955 1670 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 USP17L23D6RBM5 183 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 POC1B-GALNT4F8VUJ3 575 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 UBE2Q2LH0YL09 131 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 H7C0S8 307 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 SH2B2O14492 632 aaPredicted RBP3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 RRHO14718 337 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 HCRTR2O43614 444 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 KIF1CO43896 1103 aaKnown RBP3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 USP12O75317 370 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 ZNF202O95125 648 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 IPO7O95373 1038 aaKnown RBP3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 LCKP06239 509 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 IRF1P10914 325 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 FCGR2AP12318 317 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 POU1F1P28069 291 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 EIF2DP41214 584 aaKnown RBP3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 VPS41P49754 854 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 PLP2Q04941 152 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 FOXI1Q12951 378 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 CDC16Q13042 620 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms