RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 A0A0G2JPF8 293 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 A0A0U1RQS6 177 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MUC21A0A140T8X8 626 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MEX3AA1L020 520 aaKnown RBP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 DYTNA2CJ06 578 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PRSS29PA6NIE9 313 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 HNRNPCL3B7ZW38 293 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZNF587BE7ETH6 402 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 HNRNPCL1O60812 293 aaKnown RBP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 DNAJC8O75937 253 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SGPL1O95470 568 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 VNN1O95497 513 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 VNN2O95498 520 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 C22orf31O95567 290 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 APPP05067 770 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CSF1RP07333 972 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 HNRNPCL4P0DMR1 293 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MST1P26927 711 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 THPOP40225 353 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 LIFRP42702 1097 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SLC6A9P48067 706 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 AARSP49588 968 aaKnown RBP eCLIP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZNF280AP59817 542 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SNRPD1P62314 119 aaKnown RBP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GPC5P78333 572 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KIF23Q02241 960 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CREB5Q02930 508 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 DMWDQ09019 674 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TDGQ13569 410 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MOBPQ13875 183 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 LRRC32Q14392 662 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 EFNB3Q15768 340 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 DDR2Q16832 855 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PTCHD3Q3KNS1 767 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TTC31Q49AM3 519 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TNNI3KQ59H18 835 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MUC21Q5SSG8 566 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 UTF1Q5T230 341 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PDSS1Q5T2R2 415 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 DEPDC1Q5TB30 811 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MRM1Q6IN84 353 aaKnown RBP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SASS6Q6UVJ0 657 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 C6orf15Q6UXA7 325 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 LRRC31Q6UY01 552 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RBMS3Q6XE24 437 aaKnown RBP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZNF852Q6ZMS4 543 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 EEPD1Q7L9B9 569 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 HS2ST1Q7LGA3 356 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FGD2Q7Z6J4 655 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TXNDC2Q86VQ3 553 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 DDX42Q86XP3 938 aaKnown RBP eCLIP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ABRAQ8N0Z2 381 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 EID3Q8N140 333 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZGPATQ8N5A5 531 aaKnown RBP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 LINC00304Q8N9R0 145 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MIGA1Q8NAN2 632 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KDM1BQ8NB78 822 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZBTB34Q8NCN2 500 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TDRD7Q8NHU6 1098 aaKnown RBP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RHOXF1Q8NHV9 184 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TMEM163Q8TC26 289 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RNF138Q8WVD3 245 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SRSF12Q8WXF0 261 aaKnown RBP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CELF1Q92879 486 aaKnown RBP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CLUAP1Q96AJ1 413 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MFSD3Q96ES6 412 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 NSMCE3Q96MG7 304 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TRAPPC9Q96Q05 1148 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FAM126AQ9BYI3 521 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 B3GNT4Q9C0J1 378 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SIK2Q9H0K1 926 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 UPF3AQ9H1J1 476 aaKnown RBP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MYOZ1Q9NP98 299 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RLIMQ9NVW2 624 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ABCD2Q9UBJ2 740 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MGAT4CQ9UBM8 478 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 LIMA1Q9UHB6 759 aaKnown RBP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MUTYHQ9UIF7 546 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SIX4Q9UIU6 781 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GGT7Q9UJ14 662 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 NDRG4Q9ULP0 352 aaKnown RBP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FAF1Q9UNN5 650 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 R3HDM2Q9Y2K5 976 aaKnown RBP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PLEKHM1Q9Y4G2 1056 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SPO11Q9Y5K1 396 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SPATA31A5Q5VU36 1347 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 EMSYQ7Z589 1322 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SPATA31A7Q8IWB4 1347 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TNXBP22105 4242 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SLIT3O75094 1523 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TRAV20A0A0B4J274 112 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TRIM49BA6NDI0 452 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 B2RBV5 119 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 USP17L23D6RBM5 183 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 NEMP1O14524 444 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ITM2AO43736 263 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CIDEAO60543 219 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 NDUFS7O75251 213 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 VPS4BO75351 444 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TIPRLO75663 272 aa-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms