RNA–Protein interactions for RNA: ENST00000516473.1

RNU6-1089P-201, Transcript of RNA, U6 small nuclear 1089, pseudogene, humanhuman

BASIC

Gene RNU6-1089P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1089P-201ENST00000516473 VPS50Q96JG6 964 aa-0.39□□□□□ -2.47
RNU6-1089P-201ENST00000516473 ZNF354BQ96LW1 612 aa-0.39□□□□□ -2.47
RNU6-1089P-201ENST00000516473 GFM1Q96RP9 751 aaKnown RBP-0.39□□□□□ -2.47
RNU6-1089P-201ENST00000516473 VRK1Q99986 396 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-1089P-201ENST00000516473 MESP1Q9BRJ9 268 aa-0.39□□□□□ -2.47
RNU6-1089P-201ENST00000516473 RNF26Q9BY78 433 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-1089P-201ENST00000516473 WNT5BQ9H1J7 359 aa-0.39□□□□□ -2.47
RNU6-1089P-201ENST00000516473 MAN1C1Q9NR34 630 aa-0.39□□□□□ -2.47
RNU6-1089P-201ENST00000516473 CNNM1Q9NRU3 951 aa-0.39□□□□□ -2.47
RNU6-1089P-201ENST00000516473 ST6GALNAC1Q9NSC7 600 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-1089P-201ENST00000516473 ABHD10Q9NUJ1 306 aa-0.39□□□□□ -2.47
RNU6-1089P-201ENST00000516473 ATAD3AQ9NVI7 634 aa-0.39□□□□□ -2.47
RNU6-1089P-201ENST00000516473 ZNF224Q9NZL3 707 aa-0.39□□□□□ -2.47
RNU6-1089P-201ENST00000516473 MMACHCQ9Y4U1 282 aa-0.39□□□□□ -2.47
RNU6-1089P-201ENST00000516473 SLC4A4Q9Y6R1 1079 aa-0.39□□□□□ -2.47
RNU6-1089P-201ENST00000516473 KDM2BQ8NHM5 1336 aa-0.39□□□□□ -2.47
RNU6-1089P-201ENST00000516473 A0A0G2JLW4 131 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 PLD2O14939 933 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 MAGEB4O15481 346 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 PDPK1O15530 556 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 KCNN4O15554 427 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 RAPGEF3O95398 923 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 CH25HO95992 272 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 LCKP06239 509 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 FOLR2P14207 255 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 CHATP28329 748 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 DUSP1P28562 367 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 PRDX5P30044 214 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 FMO4P31512 558 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 LSSP48449 732 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 SLC5A3P53794 718 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 SNX16P57768 344 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 EWSR1Q01844 656 aaKnown RBP eCLIP-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 MEF2BQ02080 365 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 PPARDQ03181 441 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 KCNA1Q09470 495 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 RASGRF1Q13972 1273 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 BMS1Q14692 1282 aaKnown RBP-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 EFNB3Q15768 340 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 AMZ1Q400G9 498 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 KHDC1Q4VXA5 237 aaKnown RBP-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 GLE1Q53GS7 698 aaKnown RBP-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 CCDC157Q569K6 752 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 ZNF326Q5BKZ1 582 aaKnown RBP-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 FAM69BQ5VUD6 431 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 HEPHL1Q6MZM0 1159 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 ZNF534Q76KX8 674 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 TRPT1Q86TN4 253 aaKnown RBP-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 FAM90A1Q86YD7 464 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 HERC6Q8IVU3 1022 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 YAF2Q8IY57 180 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 SPARTQ8N0X7 666 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 CPA6Q8N4T0 437 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 METTL25Q8N6Q8 603 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 OR52N4Q8NGI2 321 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 TMEM163Q8TC26 289 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 TNPO1Q92973 898 aaKnown RBP-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 RBMXL1Q96E39 390 aaKnown RBP-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 REXO5Q96IC2 774 aaKnown RBP-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 ST6GAL2Q96JF0 529 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 TRIM2Q9C040 744 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 SAP30LQ9HAJ7 183 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 XPR1Q9UBH6 696 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 NIPSNAP3AQ9UFN0 247 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 SIX4Q9UIU6 781 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 TUBD1Q9UJT1 453 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 KCNS2Q9ULS6 477 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 ZMYND8Q9ULU4 1186 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 VPS4AQ9UN37 437 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 NEU3Q9UQ49 428 aa-0.4□□□□□ -2.47
RNU6-1089P-201ENST00000516473 IGHV3OR16-10A0A075B7F0 116 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 A0A087WUV0 522 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 PALM2-AKAP2B1ALY0 433 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 GPRIN2O60269 458 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 GAGE7O76087 117 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 UNC5CO95185 931 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 SLC3A2P08195 630 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 GAGE12FP0CL80 117 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 GAGE12GP0CL81 117 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 GAGE12IP0CL82 117 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 PIK3R1P27986 724 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 SMARCA1P28370 1054 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 HNF4AP41235 474 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 SLC6A12P48065 614 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 TMPRSS3P57727 454 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 SRSF2Q01130 221 aaKnown RBP-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 KHDRBS1Q07666 443 aaKnown RBP eCLIP-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 FUT7Q11130 342 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 GAGE1Q13065 139 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 GAGE4Q13068 117 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 EBI3Q14213 229 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 PNLIPRP3Q17RR3 467 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 WDR38Q5JTN6 314 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 OLFML2AQ68BL7 652 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 Q6P435 159 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 TFAP2EQ6VUC0 442 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 MIGA2Q7L4E1 593 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 PLD3Q8IV08 490 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 PRR22Q8IZ63 422 aa-0.41□□□□□ -2.48
RNU6-1089P-201ENST00000516473 FAM185AQ8N0U4 392 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms