RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 ZNF224Q9NZL3 707 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 IL17BQ9UHF5 180 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 TUBE1Q9UJT0 475 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 TUBD1Q9UJT1 453 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 NEU3Q9UQ49 428 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 VDAC3Q9Y277 283 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 TRBV5-7A0A0A0MS05 114 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 A0A1B0GVM2 712 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 PRR32B1ATL7 298 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 RASA4BC9J798 803 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 SGTAO43765 313 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 AIREO43918 545 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 CIDEAO60543 219 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 RFPL3SP0C7P2 107 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 PDCP20941 246 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 CHATP28329 748 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 FMO4P31512 558 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 PMELP40967 661 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 HNF4AP41235 474 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 STAT6P42226 847 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 ZFP36L2P47974 494 aaKnown RBP-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 PRKAG1P54619 331 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 SNX16P57768 344 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 TIAL1Q01085 375 aaKnown RBP eCLIP-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 PPARDQ03181 441 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 KRT17Q04695 432 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 ELAVL2Q12926 359 aaKnown RBP-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 MGAT5BQ3V5L5 792 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 AMZ1Q400G9 498 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 MTERF2Q49AM1 385 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 KHDC1Q4VXA5 237 aaKnown RBP-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 FASTKD1Q53R41 847 aaKnown RBP-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 CCDC157Q569K6 752 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 TFDP3Q5H9I0 405 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 SLC4A10Q6U841 1118 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 CEACAM19Q7Z692 300 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 NGDNQ8NEJ9 315 aaKnown RBP-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 PRSS33Q8NF86 280 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 OR52N4Q8NGI2 321 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 SLC5A5Q92911 643 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 TNPO1Q92973 898 aaKnown RBP-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 KAT5Q92993 513 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 GMPPAQ96IJ6 420 aaPredicted RBP-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 ACAP3Q96P50 834 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 CSF3RQ99062 836 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 CINPQ9BW66 212 aaPredicted RBP-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 TP63Q9H3D4 680 aaPredicted RBP-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 TMX1Q9H3N1 280 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 C1orf115Q9H7X2 142 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 GNB4Q9HAV0 340 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 TRIM36Q9NQ86 728 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 ST6GALNAC1Q9NSC7 600 aaPredicted RBP-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 RNF146Q9NTX7 359 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 AFF4Q9UHB7 1163 aaKnown RBP-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 VPS4AQ9UN37 437 aa-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 SRPRBQ9Y5M8 271 aaKnown RBP-0.62□□□□□ -2.51
RNU6-542P-201ENST00000516405 MEX3AA1L020 520 aaKnown RBP-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 CFAP69A5D8W1 941 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 CXorf65A6NEN9 183 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 CCDC85CA6NKD9 419 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 DVL1O14640 695 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 MID1O15344 667 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 PDPK1O15530 556 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 GPRIN2O60269 458 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 UNC5CO95185 931 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 CH25HO95992 272 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 TRIM49P0CI25 452 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 TRIM49CP0CI26 452 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 MTHFD2P13995 350 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 SDSP20132 328 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 EPHA3P29320 983 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 RBMS1P29558 406 aaKnown RBP-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 SLC16A2P36021 539 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 SLC6A12P48065 614 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 DVL1P1P54792 670 aaPredicted RBP-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 SRSF2Q01130 221 aaKnown RBP-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 OCRLQ01968 901 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 RELQ04864 619 aaPredicted RBP-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 SEMA3BQ13214 749 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 IL10RAQ13651 578 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 TNFAIP1Q13829 316 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 BMS1Q14692 1282 aaKnown RBP-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 KRTAP13-2Q52LG2 175 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 ALG10Q5BKT4 473 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 ALG10BQ5I7T1 473 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 STXBP5Q5T5C0 1151 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 RSBN1Q5VWQ0 802 aaPredicted RBP-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 NT5DC4Q86YG4 428 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 CD177Q8N6Q3 437 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 Q8N9L7 120 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 TEX45Q8NA69 505 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 SUMF1Q8NBK3 374 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 DNAJB14Q8TBM8 379 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 BPIFB1Q8TDL5 484 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 TANKQ92844 425 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 BADQ92934 168 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 ST6GAL2Q96JF0 529 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 TRAPPC9Q96Q05 1148 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 SLC2A13Q96QE2 648 aa-0.63□□□□□ -2.51
RNU6-542P-201ENST00000516405 OR1F2PQ96R84 312 aa-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms