RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 MAP3K6O95382 1288 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 EGFP01133 1207 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 ITGAVP06756 1048 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 CHRNB1P11230 501 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 CCNB1P14635 433 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 CES1P23141 567 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 CHRNA3P32297 505 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 ACTN2P35609 894 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 RECQLP46063 649 aaPredicted RBP7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 SERPINH1P50454 418 aaKnown RBP7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 SNRPD1P62314 119 aaKnown RBP7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 ARF5P84085 180 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 RAD51Q06609 339 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 NSUN2Q08J23 767 aaKnown RBP eCLIP7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 SNX1Q13596 522 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 LBRQ14739 615 aaKnown RBP7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 UBXN2BQ14CS0 331 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 PRKD1Q15139 912 aaPredicted RBP7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 SIX1Q15475 284 aaPredicted RBP7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 DLG2Q15700 870 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 CYP1B1Q16678 543 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 ACCSLQ4AC99 568 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 FNDC3BQ53EP0 1204 aaKnown RBP7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 EOGTQ5NDL2 527 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 TMEM215Q68D42 235 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 C4orf22Q6V702 233 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 TP53INP2Q8IXH6 220 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 SH2D3CQ8N5H7 860 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 TEX26Q8N6G2 289 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 PCDH20Q8N6Y1 951 aaKnown RBP7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 ZNF513Q8N8E2 541 aaPredicted RBP7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 CEP112Q8N8E3 955 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 PRELID2Q8N945 189 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 GRK7Q8WTQ7 553 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 CYB5D2Q8WUJ1 264 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 C1orf54Q8WWF1 131 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 HTR3CQ8WXA8 447 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 CCDC114Q96M63 670 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 QKIQ96PU8 341 aaKnown RBP eCLIP7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 LGMNQ99538 433 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 AP1M1Q9BXS5 423 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 MFSD1Q9H3U5 465 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 TBC1D17Q9HA65 648 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 PDFQ9HBH1 243 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 LTB4R2Q9NPC1 389 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 FAM86C1Q9NVL1 165 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 RBM22Q9NW64 420 aaKnown RBP eCLIP7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 TRHDEQ9UKU6 1024 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 DNPEPQ9ULA0 475 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 NDRG2Q9UN36 371 aaKnown RBP7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 R3HDM2Q9Y2K5 976 aaKnown RBP7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 SIT1Q9Y3P8 196 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 MRFAP1Q9Y605 127 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 NCOR2Q9Y618 2525 aa7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 MYO18AQ92614 2054 aaKnown RBP7.2□□□□□ -1.26
SCARNA6-201ENST00000515982 COL4A2P08572 1712 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 C5orf60A6NFR6 353 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 SHISA7A6NL88 538 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 SGK1O00141 431 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 KCNN4O15554 427 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 SYNCRIPO60506 623 aaKnown RBP7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 PHF2O75151 1096 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 MT-CO1P00395 513 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 JCHAINP01591 159 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 SRCP12931 536 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 CD72P21854 359 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 GLDCP23378 1020 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 TARSP26639 723 aaKnown RBP7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 RBL1P28749 1068 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 NTSR1P30989 418 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 TIE1P35590 1138 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 COILP38432 576 aaPredicted RBP7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 CTSOP43234 321 aaPredicted RBP7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 MAGEA9P43362 315 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 KIR2DL1P43626 348 aaPredicted RBP7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 MMP13P45452 471 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 MAPK8P45983 427 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 CSNK1DP48730 415 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 FNTAP49354 379 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 IFI35P80217 286 aaPredicted RBP7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 MESP2Q0VG99 397 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 CCINQ13939 588 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 ZNF234Q14588 700 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 ZNF235Q14590 738 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 GRM3Q14832 879 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 CYTH1Q15438 398 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 OASLQ15646 514 aaKnown RBP7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 PTPRNQ16849 979 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 TEX44Q53QW1 395 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 C2orf27AQ580R0 203 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 RALGPS1Q5JS13 557 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 NAIF1Q69YI7 327 aaPredicted RBP7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 SERPINA13PQ6UXR4 307 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 LINGO4Q6UY18 593 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 ARHGAP36Q6ZRI8 547 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 TRIM67Q6ZTA4 783 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 GSTA5Q7RTV2 222 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 PID1Q7Z2X4 250 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 MAATS1Q7Z4T9 603 aa7.19□□□□□ -1.26
SCARNA6-201ENST00000515982 CCDC105Q8IYK2 499 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms