RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 ALG10BQ5I7T1 473 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 C10orf25Q5T742 122 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 FAM69AQ5T7M9 428 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 MORN5Q5VZ52 161 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 NAA35Q5VZE5 725 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 TMEM268Q5VZI3 342 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 HMBOX1Q6NT76 420 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 DPY19L2P1Q6NXN4 242 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 AAGABQ6PD74 315 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 ANKRD13BQ86YJ7 626 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 GPSM1Q86YR5 675 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 GHDCQ8N2G8 530 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 WDR83Q9BRX9 315 aaKnown RBP5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 USP44Q9H0E7 712 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 UNC45AQ9H3U1 944 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 NRIP3Q9NQ35 241 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 NAALADL1Q9UQQ1 740 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 BTBD3Q9Y2F9 522 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 ZMYM2Q9UBW7 1377 aa5.52□□□□□ -1.53
HMGCS1-207ENST00000514610 PABPN1LA6NDY0 278 aaKnown RBP5.51□□□□□ -1.53
HMGCS1-207ENST00000514610 TEX22C9J3V5 150 aa5.51□□□□□ -1.53
HMGCS1-207ENST00000514610 SPTLC2O15270 562 aa5.51□□□□□ -1.53
HMGCS1-207ENST00000514610 ATG13O75143 517 aa5.51□□□□□ -1.53
HMGCS1-207ENST00000514610 SERPINC1P01008 464 aa5.51□□□□□ -1.53
HMGCS1-207ENST00000514610 CHRNB1P11230 501 aa5.51□□□□□ -1.53
HMGCS1-207ENST00000514610 KRT9P35527 623 aa5.51□□□□□ -1.53
HMGCS1-207ENST00000514610 DDIT3P35638 169 aa5.51□□□□□ -1.53
HMGCS1-207ENST00000514610 CASP6P55212 293 aa5.51□□□□□ -1.53
HMGCS1-207ENST00000514610 C6orf10Q5SRN2 563 aa5.51□□□□□ -1.53
HMGCS1-207ENST00000514610 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.51□□□□□ -1.53
HMGCS1-207ENST00000514610 SLC25A41Q8N5S1 370 aa5.51□□□□□ -1.53
HMGCS1-207ENST00000514610 SLC44A5Q8NCS7 719 aa5.51□□□□□ -1.53
HMGCS1-207ENST00000514610 TNIP2Q8NFZ5 429 aa5.51□□□□□ -1.53
HMGCS1-207ENST00000514610 PRSS3P2Q8NHM4 247 aa5.51□□□□□ -1.53
HMGCS1-207ENST00000514610 UBA5Q9GZZ9 404 aa5.51□□□□□ -1.53
HMGCS1-207ENST00000514610 SLC25A18Q9H1K4 315 aa5.51□□□□□ -1.53
HMGCS1-207ENST00000514610 CDH22Q9UJ99 828 aa5.51□□□□□ -1.53
HMGCS1-207ENST00000514610 CNPY2Q9Y2B0 182 aa5.51□□□□□ -1.53
HMGCS1-207ENST00000514610 ZNF804BA4D1E1 1349 aa5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 C17orf113A0A1B0GUU1 675 aa5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 GAGE10A6NGK3 116 aa5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 DDTLA6NHG4 134 aaPredicted RBP5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 TMCC1O94876 653 aa5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 TOP3BO95985 862 aaKnown RBP5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 SLC16A2P36021 539 aa5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 ABCG1P45844 678 aa5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 PTP4A2Q12974 167 aa5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 KLF9Q13886 244 aaPredicted RBP5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 SIM2Q14190 667 aaPredicted RBP5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 TRIP6Q15654 476 aaKnown RBP5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 MOB3CQ70IA8 216 aa5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 MAATS1Q7Z4T9 603 aa5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 IGFN1Q86VF2 1251 aa5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 CPXM2Q8N436 756 aa5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 DNAAF1Q8NEP3 725 aa5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 ZCCHC10Q8TBK6 192 aa5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 ZFYVE19Q96K21 471 aa5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 SPRTNQ9H040 489 aaPredicted RBP5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 PNRC2Q9NPJ4 139 aaKnown RBP5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 TRNAU1APQ9NX07 287 aaKnown RBP5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 HCN3Q9P1Z3 774 aa5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 PEMTQ9UBM1 199 aa5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 HEY2Q9UBP5 337 aa5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 FBXO40Q9UH90 709 aa5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 PNMA2Q9UL42 364 aa5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 COG5Q9UP83 839 aa5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 CAMK2AQ9UQM7 478 aa5.5□□□□□ -1.53
HMGCS1-207ENST00000514610 WDR91A4D1P6 747 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 LDLRAD4O15165 306 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 UNGP13051 313 aaPredicted RBP5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 TNFSF8P32971 234 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 DPP6P42658 865 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 PAFAH1B1P43034 410 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 CLCNKBP51801 687 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 EFNA5P52803 228 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 ARSFP54793 590 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 UFM1P61960 85 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 EFNB1P98172 346 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 GAD2Q05329 585 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 SRSF1Q07955 248 aaKnown RBP eCLIP5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 FAM180BQ6P0A1 224 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 SHC4Q6S5L8 630 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 LRRC57Q8N9N7 239 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 KDM1BQ8NB78 822 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 PPHLN1Q8NEY8 458 aaKnown RBP5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 OR4N2Q8NGD1 307 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 C16orf52Q8NHV5 167 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 RFFLQ8WZ73 363 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 HEMGNQ9BXL5 484 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 MAP6D1Q9H9H5 199 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 SMC4Q9NTJ3 1288 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 HSPB7Q9UBY9 170 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 PCDHA12Q9UN75 941 aa5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 COL3A1P02461 1466 aaPredicted RBP5.49□□□□□ -1.53
HMGCS1-207ENST00000514610 ADGRF5Q8IZF2 1346 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 FAM157AC9JC47 383 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 IFNL4K9M1U5 179 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 TSPAN4O14817 238 aa5.48□□□□□ -1.53
HMGCS1-207ENST00000514610 TNFSF14O43557 240 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms