RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 CLSTN3Q9BQT9 956 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 TRIM55Q9BYV6 548 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 BCO2Q9BYV7 579 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 SAYSD1Q9NPB0 183 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 B3GNT3Q9Y2A9 372 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 VWA7Q9Y334 891 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 NAALAD2Q9Y3Q0 740 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 SMIM23A6NLE4 172 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 TBKBP1A7MCY6 615 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 H7C4K7 107 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 ITM2AO43736 263 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 SIN3BO75182 1162 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 LRCH4O75427 683 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 PROCP04070 461 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 COL6A2P12110 1019 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 TYMPP19971 482 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 DNAJB2P25686 324 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 ARFIP2P53365 341 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 DEFB103AP81534 67 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 FOLH1Q04609 750 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 ASPHQ12797 758 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 MUM1Q2TAK8 710 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 PPP2R2DQ66LE6 453 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 CYHR1Q6ZMK1 362 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.55□□□□□ -1.2
CLIP1-205ENST00000514271 TMEM192Q8IY95 271 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 SAMD14Q8IZD0 417 aaPredicted RBP7.55□□□□□ -1.2
CLIP1-205ENST00000514271 MCRS1Q96EZ8 462 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 ANKRD36BP1Q96IX9 119 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 KLHL32Q96NJ5 620 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 PPP1R10Q96QC0 940 aaKnown RBP7.55□□□□□ -1.2
CLIP1-205ENST00000514271 SRPK1Q96SB4 655 aaKnown RBP7.55□□□□□ -1.2
CLIP1-205ENST00000514271 GAS2L1Q99501 681 aaPredicted RBP7.55□□□□□ -1.2
CLIP1-205ENST00000514271 CGRRF1Q99675 332 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 RTKNQ9BST9 563 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 TBK1Q9UHD2 729 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 PSMD13Q9UNM6 376 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 IRAK3Q9Y616 596 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 CCDC162PA2VCL2 907 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 LINC01553A4QN01 128 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 H3BNH8 94 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 DPYSL4O14531 572 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 ADAM23O75077 832 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 RECQL4O94761 1208 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 TNNC2P02585 160 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 CSH1P0DML2 217 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 CSH2P0DML3 217 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 OVGP1Q12889 678 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 RALGPS1Q5JS13 557 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 C6orf10Q5SRN2 563 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 FRMD7Q6ZUT3 714 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 UNC45BQ8IWX7 931 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 SLC39A11Q8N1S5 342 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 MFSD2AQ8NA29 543 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 ATP11CQ8NB49 1132 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 ACMSDQ8TDX5 336 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 CHPT1Q8WUD6 406 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 PTCD2Q8WV60 388 aaKnown RBP7.55□□□□□ -1.2
CLIP1-205ENST00000514271 TBC1D20Q96BZ9 403 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 CYP2S1Q96SQ9 504 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 PBX4Q9BYU1 374 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 ZNF518BQ9C0D4 1074 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 CWH43Q9H720 699 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 FNIP2Q9P278 1114 aa7.55□□□□□ -1.2
CLIP1-205ENST00000514271 BCLAF3A2AJT9 711 aaKnown RBP7.54□□□□□ -1.2
CLIP1-205ENST00000514271 H0Y3Z8 333 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 GYG2O15488 501 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 BCAS2O75934 225 aaPredicted RBP7.54□□□□□ -1.2
CLIP1-205ENST00000514271 PAPLNO95428 1278 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 THRAP10827 490 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 P4HA1P13674 534 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 PGM1P36871 562 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 ALDH7A1P49419 539 aaKnown RBP7.54□□□□□ -1.2
CLIP1-205ENST00000514271 CLPPQ16740 277 aaPredicted RBP7.54□□□□□ -1.2
CLIP1-205ENST00000514271 SV2CQ496J9 727 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 EFHC1Q5JVL4 640 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 CLLU1OSQ5K130 101 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 LPCAT4Q643R3 524 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 TRMT1LQ7Z2T5 733 aaKnown RBP7.54□□□□□ -1.2
CLIP1-205ENST00000514271 PQLC3Q8N755 202 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 FBXO36Q8NEA4 188 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 APPL2Q8NEU8 664 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 TP53INP1Q96A56 240 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 CENPKQ9BS16 269 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 TBC1D13Q9NVG8 400 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 HESX1Q9UBX0 185 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 NEUROG3Q9Y4Z2 214 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 N6AMT1Q9Y5N5 214 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 ARL5CA6NH57 179 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 PTPN2P17706 415 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 TPSB2P20231 275 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 HOXC13P31276 330 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 ASPAP45381 313 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 MXI1P50539 228 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 YWHAEP62258 255 aaKnown RBP7.54□□□□□ -1.2
CLIP1-205ENST00000514271 AP2B1P63010 937 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 TAP1Q03518 808 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 CETN1Q12798 172 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 DPYSL3Q14195 570 aa7.54□□□□□ -1.2
CLIP1-205ENST00000514271 TMEM132DQ14C87 1099 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms