RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 GABRR2P28476 465 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 HTR7P34969 479 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 CTNNB1P35222 781 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 DDX39BQ13838 428 aaKnown RBP13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 CYLC2Q14093 348 aaPredicted RBP13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 CATSPER1Q8NEC5 780 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 ZMAT2Q96NC0 199 aaKnown RBP13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 FBXO6Q9NRD1 293 aaPredicted RBP13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 ARVCFO00192 962 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 FANCGO15287 622 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 PIGNO95427 931 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 TKTP29401 623 aaKnown RBP13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 FMO4P31512 558 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 GDF10P55107 478 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 FLOT2Q14254 428 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 SCUBE1Q8IWY4 988 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 HJURPQ8NCD3 748 aaPredicted RBP13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 RFWD2Q8NHY2 731 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 OXCT2Q9BYC2 517 aaPredicted RBP13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 ING2Q9H160 280 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 MRPL46Q9H2W6 279 aaKnown RBP13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 ZDHHC18Q9NUE0 388 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 VTI1BQ9UEU0 232 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 SOX13Q9UN79 622 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 NHSQ6T4R5 1651 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 E9PAM4 449 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 UBDO15205 165 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 CLDN11O75508 207 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 IFNLR1Q8IU57 520 aaPredicted RBP13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 ZNF567Q8N184 647 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 ARMCX1Q9P291 453 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 FZD10Q9ULW2 581 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 RNASEH1O60930 286 aaKnown RBP13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 SERPIND1P05546 499 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 ATP5BP06576 529 aaKnown RBP13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 CCDC166P0CW27 439 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 HLA-DPA1P20036 260 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 CCND3P30281 292 aaPredicted RBP13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 IFNA8P32881 189 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 MAPK8P45983 427 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 TCEAL1Q15170 157 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 PPP1R15BQ5SWA1 713 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 OLFML1Q6UWY5 402 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 NECAB2Q7Z6G3 386 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 TMPRSS6Q8IU80 811 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 HOMEZQ8IX15 550 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 CEP70Q8NHQ1 597 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 HDAC10Q969S8 669 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 EME1Q96AY2 570 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 SIKE1Q9BRV8 207 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 RUBCNLQ9H714 662 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 KCNK4Q9NYG8 393 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 GABRQQ9UN88 632 aa13.28□□□□□ -0.28
PCDHA4-202ENST00000512229 A8MX80 341 aa13.27□□□□□ -0.28
PCDHA4-202ENST00000512229 KCNU1A8MYU2 1149 aa13.27□□□□□ -0.28
PCDHA4-202ENST00000512229 KPNA3O00505 521 aaPredicted RBP13.27□□□□□ -0.28
PCDHA4-202ENST00000512229 CCNCP24863 283 aa13.27□□□□□ -0.28
PCDHA4-202ENST00000512229 SOX11P35716 441 aa13.27□□□□□ -0.28
PCDHA4-202ENST00000512229 CLCN5P51795 746 aa13.27□□□□□ -0.28
PCDHA4-202ENST00000512229 OTOP3Q7RTS5 596 aa13.27□□□□□ -0.28
PCDHA4-202ENST00000512229 STK40Q8N2I9 435 aa13.27□□□□□ -0.28
PCDHA4-202ENST00000512229 SCLYQ96I15 445 aa13.27□□□□□ -0.28
PCDHA4-202ENST00000512229 ACE2Q9BYF1 805 aaPredicted RBP13.27□□□□□ -0.28
PCDHA4-202ENST00000512229 YY1AP1Q9H869 796 aa13.27□□□□□ -0.28
PCDHA4-202ENST00000512229 ACTR8Q9H981 624 aa13.27□□□□□ -0.28
PCDHA4-202ENST00000512229 PRRC2BQ5JSZ5 2229 aaKnown RBP13.27□□□□□ -0.28
PCDHA4-202ENST00000512229 SLC9A3R1O14745 358 aaPredicted RBP13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 DNAJC8O75937 253 aaPredicted RBP13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 CBX6O95503 412 aa13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 AP2A1O95782 977 aa13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 FGF1P05230 155 aa13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 DDX5P17844 614 aaKnown RBP13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 TFE3P19532 575 aaPredicted RBP13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 CDH5P33151 784 aaPredicted RBP13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 SNRPD1P62314 119 aaKnown RBP13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 VPS37AQ8NEZ2 397 aa13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 OSBPL1AQ9BXW6 950 aa13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 GGA2Q9UJY4 613 aa13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 AGO1Q9UL18 857 aaKnown RBP13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 DDX60Q8IY21 1712 aaKnown RBP13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 A0A087X1B8 175 aa13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 AKAP10O43572 662 aa13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 SPATA31D3P0C874 917 aa13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 GJA5P36382 358 aa13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 PPP3CCP48454 512 aa13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 AASDHQ4L235 1098 aaPredicted RBP13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 AGKQ53H12 422 aa13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 SPATA31D4Q6ZUB0 917 aa13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 ANKS1BQ7Z6G8 1248 aa13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 SUSD3Q96L08 255 aa13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 DCLRE1BQ9H816 532 aa13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 THG1LQ9NWX6 298 aaKnown RBP13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 EIF3LQ9Y262 564 aaKnown RBP13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 MRPS23Q9Y3D9 190 aaKnown RBP13.27□□□□□ -0.29
PCDHA4-202ENST00000512229 BTN3A1O00481 513 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 PIRO00625 290 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 HCRTO43612 131 aa13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 LTA4HP09960 611 aaKnown RBP13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 POLR2EP19388 210 aaKnown RBP13.26□□□□□ -0.29
PCDHA4-202ENST00000512229 IL2P60568 153 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms