RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 CRHR1P34998 444 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 PRIM2P49643 509 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 TMED10P49755 219 aaKnown RBP8.16□□□□□ -1.1
NEK1-208ENST00000512193 NEK2P51955 445 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 CCNG1P51959 295 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 CHN2P52757 468 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 RAB10P61026 200 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 ST8SIA6P61647 398 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 MRPS15P82914 257 aaKnown RBP8.16□□□□□ -1.1
NEK1-208ENST00000512193 KLF10Q13118 480 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 FSCN1Q16658 493 aaKnown RBP8.16□□□□□ -1.1
NEK1-208ENST00000512193 SDHAF4Q5VUM1 108 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 TNIP2Q8NFZ5 429 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 DNAJB14Q8TBM8 379 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 TRPC4APQ8TEL6 797 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 MFSD3Q96ES6 412 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 TBCDQ9BTW9 1192 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 SLC4A5Q9BY07 1137 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 FAM192AQ9GZU8 254 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 TLR8Q9NR97 1041 aaKnown RBP8.16□□□□□ -1.1
NEK1-208ENST00000512193 MARCH2Q9P0N8 246 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 LIMD1Q9UGP4 676 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 LMO7Q8WWI1 1683 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 CCDC154A6NI56 674 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 A8MX80 341 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 ALDH2P05091 517 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 SMIM10L2AP0DMW4 78 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 SMIM10L2BP0DMW5 78 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 FCGR1AP12314 374 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 IL1R2P27930 398 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 HALP42357 657 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 RAD23AP54725 363 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 MAP3K10Q02779 954 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 PWP1Q13610 501 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 SLC25A52Q3SY17 297 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 RAP1GAP2Q684P5 730 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 RINLQ6ZS11 566 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 TMEM86AQ8N2M4 240 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 ATG16L2Q8NAA4 619 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 PCDH19Q8TAB3 1148 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 HGH1Q9BTY7 390 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 BDH2Q9BUT1 245 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 ROGDIQ9GZN7 287 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 CHRAC1Q9NRG0 131 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 MPP6Q9NZW5 540 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 PCDHB8Q9UN66 801 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 DUOX1Q9NRD9 1551 aa8.16□□□□□ -1.1
NEK1-208ENST00000512193 TCRBV7S3A2A0A539 114 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 UGT1A9O60656 530 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 SNRPB2P08579 225 aaKnown RBP8.15□□□□□ -1.1
NEK1-208ENST00000512193 GSSP48637 474 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 IL5RAQ01344 420 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 PEX6Q13608 980 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 RNF220Q5VTB9 566 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 LIPMQ5VYY2 423 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 C9orf57Q5W0N0 161 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 MARK2Q7KZI7 788 aaKnown RBP8.15□□□□□ -1.1
NEK1-208ENST00000512193 STRADAQ7RTN6 431 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 TMEM192Q8IY95 271 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 SLC35B2Q8TB61 432 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 MAGEC3Q8TD91 643 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 DUSP16Q9BY84 665 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 SDCBP2Q9H190 292 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 UGT1A7Q9HAW7 530 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 UGT1A10Q9HAW8 530 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 UGT1A8Q9HAW9 530 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 ABCC13Q9NSE7 274 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 COPG2Q9UBF2 871 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 ZNF214Q9UL59 606 aaPredicted RBP8.15□□□□□ -1.1
NEK1-208ENST00000512193 C1orf232A0A0U1RR37 186 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 SMIM28A0A1B0GU29 152 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 CAPN8A6NHC0 703 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 C2CD4BA6NLJ0 364 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 SH3BGRLO75368 114 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 WFS1O76024 890 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 TM7SF2O76062 418 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 LBPP18428 481 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 POU1F1P28069 291 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 WNT3AP56704 352 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 GAD2Q05329 585 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 FAM98BQ52LJ0 330 aaKnown RBP8.15□□□□□ -1.1
NEK1-208ENST00000512193 RFWD3Q6PCD5 774 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 DRICH1Q6PGQ1 229 aaPredicted RBP8.15□□□□□ -1.1
NEK1-208ENST00000512193 GLT6D1Q7Z4J2 308 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 ZBTB46Q86UZ6 589 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 TMCO5AQ8N6Q1 288 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 BANPQ8N9N5 519 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 DLG3Q92796 817 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 GLMNQ92990 594 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 HDAC10Q969S8 669 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 ZFRQ96KR1 1074 aaKnown RBP8.15□□□□□ -1.1
NEK1-208ENST00000512193 ZFP42Q96MM3 310 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 KLHL5Q96PQ7 755 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 NPAS2Q99743 824 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 SEMA3CQ99985 751 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 MTG1Q9BT17 334 aaPredicted RBP8.15□□□□□ -1.1
NEK1-208ENST00000512193 CYLDQ9NQC7 956 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 ARHGEF3Q9NR81 526 aa8.15□□□□□ -1.1
NEK1-208ENST00000512193 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.15□□□□□ -1.1
NEK1-208ENST00000512193 SFMBT1Q9UHJ3 866 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms