RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 RNF38Q9H0F5 515 aa9.3□□□□□ -0.92
NR1I3-230ENST00000511944 GBA3Q9H227 469 aa9.3□□□□□ -0.92
NR1I3-230ENST00000511944 NEUROG2Q9H2A3 272 aa9.3□□□□□ -0.92
NR1I3-230ENST00000511944 TASP1Q9H6P5 420 aa9.3□□□□□ -0.92
NR1I3-230ENST00000511944 NDFIP2Q9NV92 336 aa9.3□□□□□ -0.92
NR1I3-230ENST00000511944 FAM53CQ9NYF3 392 aa9.3□□□□□ -0.92
NR1I3-230ENST00000511944 FAM153AQ9UHL3 310 aa9.3□□□□□ -0.92
NR1I3-230ENST00000511944 XPO7Q9UIA9 1087 aaKnown RBP9.3□□□□□ -0.92
NR1I3-230ENST00000511944 AGO1Q9UL18 857 aaKnown RBP9.3□□□□□ -0.92
NR1I3-230ENST00000511944 VANGL2Q9ULK5 521 aa9.3□□□□□ -0.92
NR1I3-230ENST00000511944 HPCAL4Q9UM19 191 aa9.3□□□□□ -0.92
NR1I3-230ENST00000511944 TBC1D30Q9Y2I9 924 aa9.3□□□□□ -0.92
NR1I3-230ENST00000511944 HCFC2Q9Y5Z7 792 aa9.3□□□□□ -0.92
NR1I3-230ENST00000511944 GRXCR1A8MXD5 290 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 ALOX15BO15296 676 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 BNIP3LO60238 219 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 RAMP2O60895 175 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 TCEA3O75764 348 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 ANXA9O76027 345 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 SUN1O94901 812 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 KLKB1P03952 638 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 CKMP06732 381 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 RHOP08100 348 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 GSTA2P09210 222 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 MYOGP15173 224 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 VAV1P15498 845 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 AVPR1AP37288 418 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 MAGEA3P43357 314 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 RENBPP51606 427 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 KCNQ1P51787 676 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 BASP1P80723 227 aaKnown RBP9.29□□□□□ -0.92
NR1I3-230ENST00000511944 IL10RBQ08334 325 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 AP1B1Q10567 949 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 WASHC5Q12768 1159 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 SERINC3Q13530 473 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 SLC12A1Q13621 1099 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 TRIP13Q15645 432 aaPredicted RBP9.29□□□□□ -0.92
NR1I3-230ENST00000511944 TEX44Q53QW1 395 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 DNAJC21Q5F1R6 531 aaKnown RBP9.29□□□□□ -0.92
NR1I3-230ENST00000511944 PRSS36Q5K4E3 855 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 RAP1GAP2Q684P5 730 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 C14orf80Q86SX3 495 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 CCNJLQ8IV13 435 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 GSPT2Q8IYD1 628 aaKnown RBP9.29□□□□□ -0.92
NR1I3-230ENST00000511944 CMTM8Q8IZV2 173 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 LGI2Q8N0V4 545 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 ARL14EPQ8N8R7 260 aaPredicted RBP9.29□□□□□ -0.92
NR1I3-230ENST00000511944 SHKBP1Q8TBC3 707 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 ZSCAN18Q8TBC5 510 aaPredicted RBP9.29□□□□□ -0.92
NR1I3-230ENST00000511944 NSMCE1Q8WV22 266 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 ZNF707Q96C28 371 aaPredicted RBP9.29□□□□□ -0.92
NR1I3-230ENST00000511944 TEKT5Q96M29 485 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 RBM15Q96T37 977 aaKnown RBP eCLIP9.29□□□□□ -0.92
NR1I3-230ENST00000511944 RUFY1Q96T51 708 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 LGMNQ99538 433 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 CORO1BQ9BR76 489 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 NAT9Q9BTE0 207 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 NKX2-4Q9H2Z4 354 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 ATXN3LQ9H3M9 355 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 TLE6Q9H808 572 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 TBC1D14Q9P2M4 693 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 FETUBQ9UGM5 382 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 CPQQ9Y646 472 aa9.29□□□□□ -0.92
NR1I3-230ENST00000511944 MKI67P46013 3256 aaKnown RBP9.29□□□□□ -0.92
NR1I3-230ENST00000511944 MTCL1Q9Y4B5 1905 aaKnown RBP9.29□□□□□ -0.92
NR1I3-230ENST00000511944 SLC9A3R1O14745 358 aaPredicted RBP9.28□□□□□ -0.92
NR1I3-230ENST00000511944 CCL16O15467 120 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 OPA1O60313 960 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 SASH3O75995 380 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 TTC4O95801 387 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 HMBSP08397 361 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 SPATA31D3P0C874 917 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 ZSCAN5DPP0CG00 497 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 CCNB1P14635 433 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 EPCAMP16422 314 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 HOXB8P17481 243 aaPredicted RBP9.28□□□□□ -0.92
NR1I3-230ENST00000511944 CES1P23141 567 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 PTPN3P26045 913 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 OR1E1P30953 314 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 HSD17B3P37058 310 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 VPS41P49754 854 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 GEMIN4P57678 1058 aaKnown RBP9.28□□□□□ -0.92
NR1I3-230ENST00000511944 LBRQ14739 615 aaKnown RBP9.28□□□□□ -0.92
NR1I3-230ENST00000511944 POLD3Q15054 466 aaPredicted RBP9.28□□□□□ -0.92
NR1I3-230ENST00000511944 RASA2Q15283 850 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 HSP90B2PQ58FF3 399 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 DENND2CQ68D51 928 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 TXNDC8Q6A555 127 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 ALG1LQ6GMV1 187 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 SPATA31D4Q6ZUB0 917 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 NLRP8Q86W28 1048 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 DENND1CQ8IV53 801 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 CCDC117Q8IWD4 279 aaPredicted RBP9.28□□□□□ -0.92
NR1I3-230ENST00000511944 ZNF567Q8N184 647 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 BBS5Q8N3I7 341 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 TEX26Q8N6G2 289 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 EFHBQ8N7U6 833 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 VN1R2Q8NFZ6 395 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 IGSF8Q969P0 613 aa9.28□□□□□ -0.92
NR1I3-230ENST00000511944 MYO19Q96H55 970 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms