RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 PDCD2Q16342 344 aaPredicted RBP4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 FAM110CQ1W6H9 321 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 CCDC38Q502W7 563 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 GORABQ5T7V8 394 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 MORN5Q5VZ52 161 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 FAM90A2PQ658T7 463 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 DENND2CQ68D51 928 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 ZNF34Q8IZ26 560 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 CLASRPQ8N2M8 674 aaKnown RBP4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 ANKRD13CQ8N6S4 541 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 PNPLA1Q8N8W4 532 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 ATG16L2Q8NAA4 619 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 STYXQ8WUJ0 223 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 REPS1Q96D71 796 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 EID2BQ96D98 161 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 FCRL4Q96PJ5 515 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 RMDN3Q96TC7 470 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 PRPF18Q99633 342 aaKnown RBP4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 MXD3Q9BW11 206 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 PPCSQ9HAB8 311 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 FSCN3Q9NQT6 498 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 SNX15Q9NRS6 342 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 LPAR3Q9UBY5 353 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 ANGPTL2Q9UKU9 493 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 SLC45A1Q9Y2W3 748 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 USP16Q9Y5T5 823 aa4.03□□□□□ -1.76
TOPBP1-208ENST00000511439 ZFYVE26Q68DK2 2539 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 FRMPD3Q5JV73 1810 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 ECM29Q5VYK3 1845 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 MYO9BQ13459 2157 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 RLFQ13129 1914 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 PNMA6EA0A0J9YXQ4 647 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 hCG_1642624A0A1W2PR95 340 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 TAF5LO75529 589 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 TNFRSF6BO95407 300 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 PROS1P07225 676 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 ANXA6P08133 673 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 CYP2B6P20813 491 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 ADRA1DP25100 572 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 CHKAP35790 457 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 HOXA4Q00056 320 aaPredicted RBP4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 FOXO1Q12778 655 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 DNASE1L3Q13609 305 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 TMEM196Q5HYL7 178 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 LCE1AQ5T7P2 110 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 ZNF626Q68DY1 528 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 SULT6B1Q6IMI4 303 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 C11orf87Q6NUJ2 197 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 NAPRTQ6XQN6 538 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 PIK3AP1Q6ZUJ8 805 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 NEK8Q86SG6 692 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 GATAD2AQ86YP4 633 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 CACNA2D3Q8IZS8 1091 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 TMEM199Q8N511 208 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 NKAPQ8N5F7 415 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 LINC01465Q8N7H1 131 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 TERB1Q8NA31 727 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 SLC44A5Q8NCS7 719 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 OVCA2Q8WZ82 227 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 CELF1Q92879 486 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 SNX18Q96RF0 628 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 MACROD1Q9BQ69 325 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 HERPUD2Q9BSE4 406 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 KATNAL1Q9BW62 490 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 TP63Q9H3D4 680 aaPredicted RBP4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 EPS8L2Q9H6S3 715 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 AGO4Q9HCK5 861 aaKnown RBP4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 POLKQ9UBT6 870 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 GJD2Q9UKL4 321 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 SPEGQ15772 3267 aa4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 USP9XQ93008 2570 aaPredicted RBP4.02□□□□□ -1.77
TOPBP1-208ENST00000511439 VPS13AQ96RL7 3174 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 EPOPA6NHQ4 379 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 H7C1Q1 480 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 TAF4O00268 1085 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 ACKR2O00590 384 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 DNPH1O43598 174 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 NBNO60934 754 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 USP1O94782 785 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 LATS1O95835 1130 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 TIMP1P01033 207 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 CA3P07451 260 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 HOXB6P17509 224 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 DRD1P21728 446 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 EPHB2P29323 1055 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 HALP42357 657 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 ALDH18A1P54886 795 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 KRTAP10-9P60411 292 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 CSHL1Q14406 222 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 GRM4Q14833 912 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 MSANTD2Q6P1R3 559 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 KIRREL2Q6UWL6 708 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 TRIM72Q6ZMU5 477 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 ZNF782Q6ZMW2 699 aaPredicted RBP4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 FASTKD5Q7L8L6 764 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 BCDIN3DQ7Z5W3 292 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 P3H2Q8IVL5 708 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 NRSN1Q8IZ57 195 aa4.01□□□□□ -1.77
TOPBP1-208ENST00000511439 C12orf76Q8N812 135 aaPredicted RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms