RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 DSG4Q86SJ6 1040 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 STK40Q8N2I9 435 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 ZCCHC9Q8N567 271 aaKnown RBP8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 NPWQ8N729 165 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 ATP11CQ8NB49 1132 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 TPCN2Q8NHX9 752 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 FAM71BQ8TC56 605 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 CTNNBL1Q8WYA6 563 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 RAPGEF5Q92565 580 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 KRT35Q92764 455 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 C1orf74Q96LT6 269 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 FEM1AQ9BSK4 669 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 SPON2Q9BUD6 331 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 C2orf49Q9BVC5 232 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 PABPC3Q9H361 631 aaKnown RBP8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 SLC32A1Q9H598 525 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 C6orf106Q9H6K1 298 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 ZWILCHQ9H900 591 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 SGK2Q9HBY8 427 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 MRPL47Q9HD33 250 aaKnown RBP8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 CWC15Q9P013 229 aaKnown RBP8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 UVRAGQ9P2Y5 699 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 PYCARDQ9ULZ3 195 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 SCML1Q9UN30 329 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 AP4E1Q9UPM8 1137 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 FARP1Q9Y4F1 1045 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 SPTBN2O15020 2390 aa8.95□□□□□ -0.98
PDLIM5-213ENST00000509357 A0A0A6YYK5 440 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 A0A1W2PP55 124 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 LRRC72A6NJI9 287 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 USP27XA6NNY8 438 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 CDX4O14627 284 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 MID1O15344 667 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 KCNK5O95279 499 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 ADH1BP00325 375 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 COMTP21964 271 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 MAN1A1P33908 653 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 ACVRL1P37023 503 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 PLK1P53350 603 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 ADCY2Q08462 1091 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 DPYSQ14117 519 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 ELAVL3Q14576 367 aaKnown RBP8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 TEAD4Q15561 434 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 DLG2Q15700 870 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 DPYSL2Q16555 572 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 TSR1Q2NL82 804 aaKnown RBP8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 FAM46CQ5VWP2 391 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 PEAR1Q5VY43 1037 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 AADACL2Q6P093 401 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 USP30Q70CQ3 517 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 ADAT2Q7Z6V5 191 aaKnown RBP8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 SETD3Q86TU7 594 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 ZNF354CQ86Y25 554 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 ARHGAP12Q8IWW6 846 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 MINDY1Q8N5J2 469 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 OR7D4Q8NG98 312 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 DNASE2BQ8WZ79 361 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 OR8D1Q8WZ84 308 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 CCDC114Q96M63 670 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 ZYG11BQ9C0D3 744 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 PCED1AQ9H1Q7 454 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 CAPN10Q9HC96 672 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 PCDH18Q9HCL0 1135 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 OR12D3Q9UGF7 316 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 IP6K2Q9UHH9 426 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 TBC1D30Q9Y2I9 924 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 BPTFQ12830 3046 aa8.94□□□□□ -0.98
PDLIM5-213ENST00000509357 CACNA1AO00555 2505 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 NCOR2Q9Y618 2525 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 BTNL10A8MVZ5 291 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 C1QTNF3-AMACRE9PGA6 284 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 MYO1FO00160 1098 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 CBX4O00257 560 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 TM4SF5O14894 197 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 FANCGO15287 622 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 ARHGAP6O43182 974 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 SNAP91O60641 907 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 ZNF821O75541 412 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 ZMPSTE24O75844 475 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 MT-CO1P00395 513 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 VAV1P15498 845 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 C5AR1P21730 350 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 GJC1P36383 396 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 RECQLP46063 649 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 DNA2P51530 1060 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 AFF3P51826 1226 aaKnown RBP8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 GRIK2Q13002 908 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 DPYSL3Q14195 570 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 PIGHQ14442 188 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 POM121L1PQ3SYA9 428 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 ERMARDQ5T6L9 678 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 N4BP2L1Q5TBK1 243 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 RETSATQ6NUM9 610 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 ARHGAP36Q6ZRI8 547 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 Q6ZVU0 165 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 POLNQ7Z5Q5 900 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 REXO1L1PQ8IX06 675 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 PQLC3Q8N755 202 aa8.93□□□□□ -0.98
PDLIM5-213ENST00000509357 DEFB124Q8NES8 71 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms