RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 ASNSD1Q9NWL6 643 aa2.59□□□□□ -1.99
DEPDC1B-204ENST00000509006 ZNF212Q9UDV6 495 aa2.59□□□□□ -1.99
DEPDC1B-204ENST00000509006 ITGB1BP2Q9UKP3 347 aa2.59□□□□□ -1.99
DEPDC1B-204ENST00000509006 ZHX1Q9UKY1 873 aaPredicted RBP2.59□□□□□ -1.99
DEPDC1B-204ENST00000509006 TBX20Q9UMR3 447 aa2.59□□□□□ -1.99
DEPDC1B-204ENST00000509006 SUFUQ9UMX1 484 aa2.59□□□□□ -1.99
DEPDC1B-204ENST00000509006 MAN2B2Q9Y2E5 1009 aa2.59□□□□□ -1.99
DEPDC1B-204ENST00000509006 A0A1W2PPH5 198 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 GTPBP10A4D1E9 387 aaKnown RBP2.58□□□□□ -2
DEPDC1B-204ENST00000509006 CLEC18AA5D8T8 446 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 EFCAB8A8MWE9 144 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 IPO5O00410 1097 aaKnown RBP2.58□□□□□ -2
DEPDC1B-204ENST00000509006 AP3D1O14617 1153 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 P4HA2O15460 535 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 LINC01565O15544 149 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 DHX16O60231 1041 aaKnown RBP2.58□□□□□ -2
DEPDC1B-204ENST00000509006 USO1O60763 962 aaKnown RBP2.58□□□□□ -2
DEPDC1B-204ENST00000509006 ZC3H11AO75152 810 aaKnown RBP eCLIP2.58□□□□□ -2
DEPDC1B-204ENST00000509006 MTA2O94776 668 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 CCNDBP1O95273 360 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 MT-ND5P03915 603 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 FGF3P11487 239 aaPredicted RBP2.58□□□□□ -2
DEPDC1B-204ENST00000509006 ABCD1P33897 745 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 PAFAH1B1P43034 410 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 MSH2P43246 934 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 VPS41P49754 854 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 DGKQP52824 942 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 RARSP54136 660 aaKnown RBP2.58□□□□□ -2
DEPDC1B-204ENST00000509006 CASP6P55212 293 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 AP2B1P63010 937 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 CHRNDQ07001 517 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.58□□□□□ -2
DEPDC1B-204ENST00000509006 DMWDQ09019 674 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 CDC16Q13042 620 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 PRPF4BQ13523 1007 aaKnown RBP2.58□□□□□ -2
DEPDC1B-204ENST00000509006 EIF4A2Q14240 407 aaKnown RBP2.58□□□□□ -2
DEPDC1B-204ENST00000509006 NFATC4Q14934 902 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 DLGAP5Q15398 846 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 RAB30Q15771 203 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 KLHDC7AQ5VTJ3 777 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 GPR139Q6DWJ6 353 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 ABLIM2Q6H8Q1 611 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 ISM2Q6H9L7 571 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 JMJD6Q6NYC1 403 aaPredicted RBP2.58□□□□□ -2
DEPDC1B-204ENST00000509006 C11orf88Q6PI97 169 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 ZNF474Q6S9Z5 364 aaPredicted RBP2.58□□□□□ -2
DEPDC1B-204ENST00000509006 CASC1Q6TDU7 716 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 KLHL24Q6TFL4 600 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 KYAT3Q6YP21 454 aaKnown RBP2.58□□□□□ -2
DEPDC1B-204ENST00000509006 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 RAB11FIP2Q7L804 512 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 LCA5Q86VQ0 697 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 SNX32Q86XE0 403 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 IQCA1Q86XH1 822 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 VSIG1Q86XK7 387 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 UEVLDQ8IX04 471 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 TEX11Q8IYF3 940 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 CCDC105Q8IYK2 499 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 NRSN1Q8IZ57 195 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 ADGRF4Q8IZF3 695 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 CLEC18CQ8NCF0 446 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 CCDC191Q8NCU4 936 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 ZFPM2Q8WW38 1151 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 HERVK_113Q902F9 699 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 AKAP1Q92667 903 aaKnown RBP eCLIP2.58□□□□□ -2
DEPDC1B-204ENST00000509006 NEUROG1Q92886 237 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 SLF1Q9BQI6 1058 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 WDR83Q9BRX9 315 aaKnown RBP2.58□□□□□ -2
DEPDC1B-204ENST00000509006 NTPCRQ9BSD7 190 aaKnown RBP2.58□□□□□ -2
DEPDC1B-204ENST00000509006 TXLNGYQ9BZA5 131 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 RBM38Q9H0Z9 239 aaKnown RBP2.58□□□□□ -2
DEPDC1B-204ENST00000509006 SLC25A32Q9H2D1 315 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 TAF1DQ9H5J8 278 aaPredicted RBP2.58□□□□□ -2
DEPDC1B-204ENST00000509006 ELAC1Q9H777 363 aaKnown RBP2.58□□□□□ -2
DEPDC1B-204ENST00000509006 HEYLQ9NQ87 328 aaPredicted RBP2.58□□□□□ -2
DEPDC1B-204ENST00000509006 TMLHEQ9NVH6 421 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 RASAL2Q9UJF2 1139 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 NFU1Q9UMS0 254 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 VPS4AQ9UN37 437 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 PCDHB2Q9Y5E7 798 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 PASKQ96RG2 1323 aa2.58□□□□□ -2
DEPDC1B-204ENST00000509006 ZNF335Q9H4Z2 1342 aaPredicted RBP2.58□□□□□ -2
DEPDC1B-204ENST00000509006 FAM234BA2RU67 622 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 F8W8V4 182 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 H7C0S8 307 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 TSPAN4O14817 238 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 FAM155BO75949 473 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 ACTL6BO94805 426 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 SGPL1O95470 568 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 DNTTP04053 509 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 TK1P04183 234 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 CHRNB1P11230 501 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 CKMT1AP12532 417 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 SCG2P13521 617 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 ATP1A3P13637 1013 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 AKR1B1P15121 316 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 ATP6V1B1P15313 513 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 NPPBP16860 134 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 STMN1P16949 149 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 MATN1P21941 496 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms