RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 CERS2Q96G23 380 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 TMEM176AQ96HP8 235 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 RBM4BQ9BQ04 359 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 TRMOQ9BU70 441 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 RBM4Q9BWF3 364 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 TTYH3Q9C0H2 523 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 IL22Q9GZX6 179 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 UNC93B1Q9H1C4 597 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 ERVK-5Q9HDB9 667 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 PACSIN3Q9UKS6 424 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 EFR3BQ9Y2G0 817 aa7.41□□□□□ -1.22
UBE2D3-224ENST00000508474 RPTORQ8N122 1335 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 BCLAF3A2AJT9 711 aaKnown RBP7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 PLA2G6O60733 806 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 KLHL18O94889 574 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 IDO1P14902 403 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 GNL1P36915 607 aaPredicted RBP7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 IFNGR2P38484 337 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 MARCKSL1P49006 195 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 STARP49675 285 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 BCAT1P54687 386 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 SLC12A3P55017 1021 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 GMFBP60983 142 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 ALDH6A1Q02252 535 aaKnown RBP7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 CDK18Q07002 472 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 CBWD6Q4V339 395 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 CBWD3Q5JTY5 395 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 CBWD5Q5RIA9 395 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 ZNF549Q6P9A3 640 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 CYP2U1Q7Z449 544 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 OR8H1Q8NGG4 311 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 MTMR9Q96QG7 549 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 ACE2Q9BYF1 805 aaPredicted RBP7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 C1orf21Q9H246 121 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 WDCPQ9H6R7 721 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 IGSF9Q9P2J2 1179 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 STON1Q9Y6Q2 735 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 hCG_1818297A0A087WSY0 165 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 UGT1A9O60656 530 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 PRKD3O94806 890 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 YES1P07947 543 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 TCF4P15884 667 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 PORP16435 677 aaPredicted RBP7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 UGT1A6P19224 532 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 UGT1A1P22309 533 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 UGT1A4P22310 534 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 RBL1P28749 1068 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 UGT1A3P35503 534 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 UGT1A5P35504 534 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 PIK3CGP48736 1102 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 SLC7A2P52569 658 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 ZNF423Q2M1K9 1284 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 TMEM53Q6P2H8 277 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 SYCE2Q6PIF2 218 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 SLC9A9Q8IVB4 645 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 PLEKHO2Q8TD55 490 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 ADI1Q9BV57 179 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 ELOVL6Q9H5J4 265 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 UGT1A7Q9HAW7 530 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 UGT1A10Q9HAW8 530 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 UGT1A8Q9HAW9 530 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 PNPOQ9NVS9 261 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 ROBO3Q96MS0 1386 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 A0A0A0MRY4 1105 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 IRGMA1A4Y4 181 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 MGAT4DA6NG13 374 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 BNIP3LO60238 219 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 DNAJA2O60884 412 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 UPP2O95045 317 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 THRBP10828 461 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 ITGA2P17301 1181 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 S100A3P33764 101 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 PTGIRP43119 386 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 SLC16A1P53985 500 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 PSMD4P55036 377 aaKnown RBP7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 RPS7P62081 194 aaKnown RBP7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 CSNK2BP67870 215 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 PTP4A2Q12974 167 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 NDUFAF6Q330K2 333 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 INTS11Q5TA45 600 aaKnown RBP7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 KHDRBS2Q5VWX1 349 aaKnown RBP7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 FAM131AQ6UXB0 335 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 PDSS2Q86YH6 399 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 PHF13Q86YI8 300 aaPredicted RBP7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 C10orf107Q8IVU9 208 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 C4orf19Q8IY42 314 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 ZNF420Q8TAQ5 688 aaPredicted RBP7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 HELQQ8TDG4 1101 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 SPIRE2Q8WWL2 714 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 LPAR1Q92633 364 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 SPATA13Q96N96 652 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 COMMD9Q9P000 198 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 SH3BP1Q9Y3L3 701 aa7.4□□□□□ -1.22
UBE2D3-224ENST00000508474 ZC3H13Q5T200 1668 aaKnown RBP7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 FAM240BA0A1B0GVZ2 78 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 FAM92AA1XBS5 289 aa7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 NCF1BA6NI72 391 aaPredicted RBP7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 NCF1CA8MVU1 366 aaPredicted RBP7.4□□□□□ -1.23
UBE2D3-224ENST00000508474 E7ENX8 843 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms