RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 PPARGC1AQ9UBK2 798 aaKnown RBP13.3□□□□□ -0.28
HMGCS1-205ENST00000508319 NEU3Q9UQ49 428 aa13.3□□□□□ -0.28
HMGCS1-205ENST00000508319 CA5BQ9Y2D0 317 aa13.3□□□□□ -0.28
HMGCS1-205ENST00000508319 FARP1Q9Y4F1 1045 aaPredicted RBP13.3□□□□□ -0.28
HMGCS1-205ENST00000508319 SMG1Q96Q15 3661 aaKnown RBP13.3□□□□□ -0.28
HMGCS1-205ENST00000508319 TRPM6Q9BX84 2022 aa13.3□□□□□ -0.28
HMGCS1-205ENST00000508319 IGSF10Q6WRI0 2623 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 C2CD4BA6NLJ0 364 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 ENC1O14682 589 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 RNGTTO60942 597 aaKnown RBP13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 GJB6O95452 261 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 PRNPP04156 253 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 ITGAVP06756 1048 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 SERPINH1P50454 418 aaKnown RBP13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 GSCP56915 257 aaPredicted RBP13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 ARF5P84085 180 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 NRG1Q02297 640 aaPredicted RBP13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 OVGP1Q12889 678 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 BNIP3Q12983 259 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 CAMK2BQ13554 666 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 CDO1Q16878 200 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 C15orf59Q2T9L4 293 aaPredicted RBP13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 CCDC14Q49A88 953 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 CCDC157Q569K6 752 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 MANEALQ5VSG8 457 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 DHRS13Q6UX07 377 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 DPY19L3Q6ZPD9 716 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 GALNT15Q8N3T1 639 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 OXR1Q8N573 874 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 JOSD2Q8TAC2 188 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 RXFP2Q8WXD0 754 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 CNDP2Q96KP4 475 aaKnown RBP13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 ZYG11BQ9C0D3 744 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 ATP13A1Q9HD20 1204 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 FANCLQ9NW38 375 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 IL36AQ9UHA7 158 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 DAAM1Q9Y4D1 1078 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 WASF2Q9Y6W5 498 aa13.29□□□□□ -0.28
HMGCS1-205ENST00000508319 A0A1W2PQU0 124 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 FAM149AA5PLN7 773 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 PRAMEF26H0Y7S4 382 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 LEFTY1O75610 366 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 LDOC1O95751 146 aaPredicted RBP13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 UNGP13051 313 aaPredicted RBP13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 PRLRP16471 622 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 SDC4P31431 198 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 PTPN9P43378 593 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 ACADVLP49748 655 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 COPB1P53618 953 aaKnown RBP13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 GNA12Q03113 381 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 PTP4A2Q12974 167 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 DNAJC3Q13217 504 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 STAT4Q14765 748 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 SYCP1Q15431 976 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 ZNF284Q2VY69 593 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 FKBP15Q5T1M5 1219 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 TRIM72Q6ZMU5 477 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 ERN2Q76MJ5 926 aaKnown RBP13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 PHLDB2Q86SQ0 1253 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 NLRP14Q86W24 1093 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 DRC7Q8IY82 874 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 EID2Q8N6I1 236 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 SLC30A5Q8TAD4 765 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 PCDHB18PQ96TA0 734 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 MYOCQ99972 504 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 SPON2Q9BUD6 331 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 HDAC8Q9BY41 377 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 CEP44Q9C0F1 390 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 NDFIP2Q9NV92 336 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 DKK4Q9UBT3 224 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 OR12D3Q9UGF7 316 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 ZFR2Q9UPR6 939 aaKnown RBP13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 PCDHGA1Q9Y5H4 931 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 ACTL7AQ9Y615 435 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 ADAMTS20P59510 1910 aa13.28□□□□□ -0.28
HMGCS1-205ENST00000508319 URB1O60287 2271 aaKnown RBP13.27□□□□□ -0.28
HMGCS1-205ENST00000508319 LGALS16A8MUM7 142 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 FAM72CH0Y354 149 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 SLC31A1O15431 190 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 MAGEC1O60732 1142 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 RFPL3O75679 317 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 CD160O95971 181 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 TPM2P07951 284 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 ADRA1BP35368 520 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 ACVRL1P37023 503 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 STAT1P42224 750 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 RECQLP46063 649 aaPredicted RBP13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 HDAC4P56524 1084 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 TMEM259Q4ZIN3 620 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 ARSIQ5FYB1 569 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 FAM72AQ5TYM5 149 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 FAM72DQ6L9T8 149 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 RETSATQ6NUM9 610 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 NEK5Q6P3R8 708 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 HORMAD1Q86X24 394 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 FAM72BQ86X60 149 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 PCDH20Q8N6Y1 951 aaKnown RBP13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 CCDC185Q8N715 623 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 TSC1Q92574 1164 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 CENPIQ92674 756 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms