RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 SGSHP51688 502 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 ST8SIA6P61647 398 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 RPS24P62847 133 aaKnown RBP8.25□□□□□ -1.09
SCN1A-207ENST00000507401 INSM1Q01101 510 aaPredicted RBP8.25□□□□□ -1.09
SCN1A-207ENST00000507401 PTSQ03393 145 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 SULT2A1Q06520 285 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 SLC14A1Q13336 389 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 CDH18Q13634 790 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 DRAP1Q14919 205 aaPredicted RBP8.25□□□□□ -1.09
SCN1A-207ENST00000507401 C5orf22Q49AR2 442 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 FNDC3BQ53EP0 1204 aaKnown RBP8.25□□□□□ -1.09
SCN1A-207ENST00000507401 GLE1Q53GS7 698 aaKnown RBP8.25□□□□□ -1.09
SCN1A-207ENST00000507401 CDKAL1Q5VV42 579 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 OR6B2Q6IFH4 312 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 OLFML1Q6UWY5 402 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 ARCQ7LC44 396 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 ZNF677Q86XU0 584 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 RGL4Q8IZJ4 473 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 CFAP52Q8N1V2 620 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 CARNMT1Q8N4J0 409 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 DEFB119Q8N690 84 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 EIF1ADQ8N9N8 165 aaKnown RBP8.25□□□□□ -1.09
SCN1A-207ENST00000507401 WFDC5Q8TCV5 224 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 CYB5D2Q8WUJ1 264 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 NT5C3BQ969T7 300 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 C18orf8Q96DM3 657 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 PGAP3Q96FM1 320 aaPredicted RBP8.25□□□□□ -1.09
SCN1A-207ENST00000507401 HSPA12BQ96MM6 686 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 PRICKLE1Q96MT3 831 aaPredicted RBP8.25□□□□□ -1.09
SCN1A-207ENST00000507401 RUFY1Q96T51 708 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 PRMT1Q99873 361 aaKnown RBP8.25□□□□□ -1.09
SCN1A-207ENST00000507401 SH3GL3Q99963 347 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 ZDHHC5Q9C0B5 715 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 NUCKS1Q9H1E3 243 aaKnown RBP8.25□□□□□ -1.09
SCN1A-207ENST00000507401 SLC6A17Q9H1V8 727 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 HAUS4Q9H6D7 363 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 SYNCQ9H7C4 482 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 ZNF395Q9H8N7 513 aaPredicted RBP8.25□□□□□ -1.09
SCN1A-207ENST00000507401 PRSS16Q9NQE7 514 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 STIM2Q9P246 746 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 AJAP1Q9UKB5 411 aaPredicted RBP8.25□□□□□ -1.09
SCN1A-207ENST00000507401 INTS6Q9UL03 887 aaKnown RBP8.25□□□□□ -1.09
SCN1A-207ENST00000507401 PCDHB9Q9Y5E1 797 aa8.25□□□□□ -1.09
SCN1A-207ENST00000507401 A0A1B0GTW7 788 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 F5H5T6 163 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 RNASEH1O60930 286 aaKnown RBP8.24□□□□□ -1.09
SCN1A-207ENST00000507401 DAB1O75553 588 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 SYF2O95926 243 aaKnown RBP8.24□□□□□ -1.09
SCN1A-207ENST00000507401 MOCS2O96007 188 aaPredicted RBP8.24□□□□□ -1.09
SCN1A-207ENST00000507401 DNTTP04053 509 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 ERBB2P04626 1255 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 CFIP05156 583 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 HLA-EP13747 358 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 CSKP41240 450 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 CXCR3P49682 368 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 ATXN3P54252 364 aaPredicted RBP8.24□□□□□ -1.09
SCN1A-207ENST00000507401 RPS14P62263 151 aaKnown RBP8.24□□□□□ -1.09
SCN1A-207ENST00000507401 VSNL1P62760 191 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 KRT83P78385 493 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 SHC2P98077 582 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 ECT2LQ008S8 904 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 SEMA3BQ13214 749 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 RAPGEF1Q13905 1077 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 HNRNPDQ14103 355 aaKnown RBP8.24□□□□□ -1.09
SCN1A-207ENST00000507401 NR1I3Q14994 352 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 HNRNPA1L2Q32P51 320 aaKnown RBP8.24□□□□□ -1.09
SCN1A-207ENST00000507401 PTPN20Q4JDL3 420 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 HSP90AA4PQ58FG1 418 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 FSCBQ5H9T9 825 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 PITRM1Q5JRX3 1037 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 BRMS1LQ5PSV4 323 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 RABGAP1LQ5R372 815 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 N4BP2L1Q5TBK1 243 aaPredicted RBP8.24□□□□□ -1.09
SCN1A-207ENST00000507401 RAP1GAP2Q684P5 730 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 FAM183BPQ6ZVS7 135 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 USP30Q70CQ3 517 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 ZNF572Q7Z3I7 529 aaPredicted RBP8.24□□□□□ -1.09
SCN1A-207ENST00000507401 CHSY1Q86X52 802 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 ERICH1Q86X53 443 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 PASD1Q8IV76 773 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 LGI2Q8N0V4 545 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 RNF217Q8TC41 542 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 BCAS4Q8TDM0 211 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 RNF34Q969K3 372 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 MYEOVQ96EZ4 313 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 MYO19Q96H55 970 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 MRGPRX3Q96LB0 322 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 C1orf74Q96LT6 269 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 NPY6RQ99463 290 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 GPR174Q9BXC1 333 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 RSPH9Q9H1X1 276 aaPredicted RBP8.24□□□□□ -1.09
SCN1A-207ENST00000507401 SLC32A1Q9H598 525 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 SGK2Q9HBY8 427 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 OSGEPQ9NPF4 335 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 SPATS2LQ9NUQ6 558 aaKnown RBP8.24□□□□□ -1.09
SCN1A-207ENST00000507401 FANCLQ9NW38 375 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 DDIT4Q9NX09 232 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.24□□□□□ -1.09
SCN1A-207ENST00000507401 RNF14Q9UBS8 474 aa8.24□□□□□ -1.09
SCN1A-207ENST00000507401 XPO7Q9UIA9 1087 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms