RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 RDH11Q8TC12 318 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 NIFKQ9BYG3 293 aaKnown RBP17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 KIAA1522Q9P206 1035 aaPredicted RBP17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 HESX1Q9UBX0 185 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 TMED5Q9Y3A6 229 aa17.37■□□□□ 0.37
SQSTM1-211ENST00000506690 PRORSD1PA6NEY8 169 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 SULT1C4O75897 302 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 STAMBPO95630 424 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 APOA4P06727 396 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 ASNSP08243 561 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 SBK3P0C264 359 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 CYP3A5P20815 502 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 SDC4P31431 198 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 GALNT2Q10471 571 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 FGD3Q5JSP0 725 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 GK5Q6ZS86 529 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 TERB1Q8NA31 727 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 LPAR1Q92633 364 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 TANKQ92844 425 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 KHSRPQ92945 711 aaKnown RBP eCLIP17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 MAELQ96JY0 434 aaKnown RBP17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 EFHD1Q9BUP0 239 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 ZNF302Q9NR11 478 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 SMOXQ9NWM0 555 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 CD300AQ9UGN4 299 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 GTF2IRD1Q9UHL9 959 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 GNPTGQ9UJJ9 305 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 HEATR9A2RTY3 570 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 TK2O00142 265 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 ZNF24P17028 368 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 PPIL2Q13356 520 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 PMS2P3Q13401 168 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 LRP8Q14114 963 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 AARS2Q5JTZ9 985 aaKnown RBP17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 TMEM53Q6P2H8 277 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 OLFML1Q6UWY5 402 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 PACRGLQ8N7B6 248 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 CDHR1Q96JP9 859 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 HEXIM2Q96MH2 286 aaKnown RBP17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 AGAP2Q99490 1192 aa17.36■□□□□ 0.37
SQSTM1-211ENST00000506690 CABYRO75952 493 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 F7P08709 466 aaPredicted RBP17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 CSRP3P50461 194 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 BMXP51813 675 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 EFNA5P52803 228 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 NAGLUP54802 743 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 GLRA4Q5JXX5 417 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 C6orf10Q5SRN2 563 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 NCBP2-AS2Q69YL0 99 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 ANKRD26P1Q6NSI1 321 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 C16orf87Q6PH81 154 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 EEPD1Q7L9B9 569 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 ZNF354CQ86Y25 554 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 PBXIP1Q96AQ6 731 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 APBA2Q99767 749 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 ARMC7Q9H6L4 198 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 ZNF70Q9UC06 446 aaPredicted RBP17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 HACD1B0YJ81 288 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 SPATA31C2B4DYI2 1134 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 PFKMP08237 780 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 CDH3P22223 829 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 NME5P56597 212 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 RAB39AQ14964 217 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 GPR107Q5VW38 600 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 DPH6Q7L8W6 267 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 PELI3Q8N2H9 469 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 PGLYRP2Q96PD5 576 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 CSPG4P5Q96PW8 444 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 TCF12Q99081 682 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 LGMNQ99538 433 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 MPHOSPH6Q99547 160 aaKnown RBP17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 MCMBPQ9BTE3 642 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 MAGEB5Q9BZ81 275 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 ARMC1Q9NVT9 282 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 CACNA2D2Q9NY47 1150 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 FAM32AQ9Y421 112 aaKnown RBP17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 RIPK3Q9Y572 518 aa17.35■□□□□ 0.37
SQSTM1-211ENST00000506690 RBM47A0AV96 593 aaKnown RBP17.34■□□□□ 0.37
SQSTM1-211ENST00000506690 TIPRLO75663 272 aa17.34■□□□□ 0.37
SQSTM1-211ENST00000506690 RALGDSQ12967 914 aa17.34■□□□□ 0.37
SQSTM1-211ENST00000506690 STX5Q13190 355 aa17.34■□□□□ 0.37
SQSTM1-211ENST00000506690 DGKZQ13574 1117 aa17.34■□□□□ 0.37
SQSTM1-211ENST00000506690 BCL2A1Q16548 175 aa17.34■□□□□ 0.37
SQSTM1-211ENST00000506690 INTS11Q5TA45 600 aaKnown RBP17.34■□□□□ 0.37
SQSTM1-211ENST00000506690 MAP1SQ66K74 1059 aaPredicted RBP17.34■□□□□ 0.37
SQSTM1-211ENST00000506690 CYP2R1Q6VVX0 501 aa17.34■□□□□ 0.37
SQSTM1-211ENST00000506690 ERMP1Q7Z2K6 904 aa17.34■□□□□ 0.37
SQSTM1-211ENST00000506690 TMEM130Q8N3G9 435 aa17.34■□□□□ 0.37
SQSTM1-211ENST00000506690 C1orf127Q8N9H9 656 aa17.34■□□□□ 0.37
SQSTM1-211ENST00000506690 ACVR1CQ8NER5 493 aa17.34■□□□□ 0.37
SQSTM1-211ENST00000506690 SLC16A10Q8TF71 515 aa17.34■□□□□ 0.37
SQSTM1-211ENST00000506690 PPWD1Q96BP3 646 aaKnown RBP17.34■□□□□ 0.37
SQSTM1-211ENST00000506690 C1QTNF1Q9BXJ1 281 aa17.34■□□□□ 0.37
SQSTM1-211ENST00000506690 SPAG4Q9NPE6 437 aa17.34■□□□□ 0.37
SQSTM1-211ENST00000506690 TRNAU1APQ9NX07 287 aaKnown RBP17.34■□□□□ 0.37
SQSTM1-211ENST00000506690 GGA3Q9NZ52 723 aa17.34■□□□□ 0.37
SQSTM1-211ENST00000506690 MFHAS1Q9Y4C4 1052 aa17.34■□□□□ 0.37
SQSTM1-211ENST00000506690 EPHX2P34913 555 aa17.33■□□□□ 0.37
SQSTM1-211ENST00000506690 ABCG1P45844 678 aa17.33■□□□□ 0.37
SQSTM1-211ENST00000506690 GTF2A2P52657 109 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms