RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 TPGS1Q6ZTW0 290 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 PCGF5Q86SE9 256 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 APCDD1Q8J025 514 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 CARNMT1Q8N4J0 409 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.59□□□□□ -0.71
TPM3-217ENST00000504663 SMRP1Q8NCR6 262 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 FIBINQ8TAL6 211 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 OSCP1Q8WVF1 389 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 SMARCD2Q92925 531 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 IRF7Q92985 503 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 EXOC4Q96A65 974 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 PABPC5Q96DU9 382 aaKnown RBP10.59□□□□□ -0.71
TPM3-217ENST00000504663 TMA16Q96EY4 203 aaKnown RBP10.59□□□□□ -0.71
TPM3-217ENST00000504663 ZNF599Q96NL3 588 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 AGAP3Q96P47 875 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 FCRL5Q96RD9 977 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 FEM1AQ9BSK4 669 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 TMUB1Q9BVT8 246 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 PLA2G2FQ9BZM2 168 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 FOXP3Q9BZS1 431 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 SEMA4AQ9H3S1 761 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 POMKQ9H5K3 350 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 GLOD4Q9HC38 313 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 HPS4Q9NQG7 708 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 OBP2AQ9NY56 170 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 PLK2Q9NYY3 685 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 GDE1Q9NZC3 331 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 KLHL8Q9P2G9 620 aaPredicted RBP10.59□□□□□ -0.71
TPM3-217ENST00000504663 FBXO10Q9UK96 956 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 CDH7Q9ULB5 785 aa10.59□□□□□ -0.71
TPM3-217ENST00000504663 OTOL1A6NHN0 477 aaPredicted RBP10.58□□□□□ -0.72
TPM3-217ENST00000504663 HEPACAM2A8MVW5 462 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 SMAPO00193 183 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 ALOX15BO15296 676 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 RIPK2O43353 540 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 AVILO75366 819 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 AP2A1O95782 977 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 ARSAP15289 507 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 PLK1P53350 603 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 PMS2P54278 862 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 SKOR1P84550 965 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 MLLT1Q03111 559 aaPredicted RBP10.58□□□□□ -0.72
TPM3-217ENST00000504663 FCHO2Q0JRZ9 810 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 MESP2Q0VG99 397 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 LBRQ14739 615 aaKnown RBP10.58□□□□□ -0.72
TPM3-217ENST00000504663 CYTH1Q15438 398 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 FUT11Q495W5 492 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 SPDYCQ5MJ68 293 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 TRIM68Q6AZZ1 485 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 TANGO2Q6ICL3 276 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 DENND5AQ6IQ26 1287 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 VITQ6UXI7 678 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 LEKR1Q6ZMV7 388 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 C12orf40Q86WS4 652 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 MFN1Q8IWA4 741 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 ETFBKMTQ8IXQ9 262 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 ADGRG2Q8IZP9 1017 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 PHTF2Q8N3S3 785 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 PDCD7Q8N8D1 485 aaKnown RBP10.58□□□□□ -0.72
TPM3-217ENST00000504663 DCAF4L2Q8NA75 395 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 ST13P5Q8NFI4 369 aaPredicted RBP10.58□□□□□ -0.72
TPM3-217ENST00000504663 SPATA22Q8NHS9 363 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 BHMTQ93088 406 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 OTUB2Q96DC9 234 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 IMP4Q96G21 291 aaKnown RBP10.58□□□□□ -0.72
TPM3-217ENST00000504663 SIGLEC10Q96LC7 697 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 ZIM3Q96PE6 472 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 RBM15Q96T37 977 aaKnown RBP eCLIP10.58□□□□□ -0.72
TPM3-217ENST00000504663 FAM83CQ9BQN1 747 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 MGME1Q9BQP7 344 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 VIPAS39Q9H9C1 493 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 SP110Q9HB58 689 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 ATP13A1Q9HD20 1204 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 SPHK2Q9NRA0 654 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 RBM22Q9NW64 420 aaKnown RBP eCLIP10.58□□□□□ -0.72
TPM3-217ENST00000504663 CLDND1Q9NY35 253 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 DONSONQ9NYP3 566 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 LHX3Q9UBR4 397 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 MTRF1LQ9UGC7 380 aaKnown RBP10.58□□□□□ -0.72
TPM3-217ENST00000504663 VPS51Q9UID3 782 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 TEX264Q9Y6I9 313 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 TICRRQ7Z2Z1 1910 aa10.58□□□□□ -0.72
TPM3-217ENST00000504663 TTC24A2A3L6 582 aaPredicted RBP10.57□□□□□ -0.72
TPM3-217ENST00000504663 ARNTLO00327 626 aa10.57□□□□□ -0.72
TPM3-217ENST00000504663 NDC80O14777 642 aa10.57□□□□□ -0.72
TPM3-217ENST00000504663 TRIM24O15164 1050 aa10.57□□□□□ -0.72
TPM3-217ENST00000504663 EIF3HO15372 352 aaKnown RBP eCLIP10.57□□□□□ -0.72
TPM3-217ENST00000504663 HOXC11O43248 304 aaPredicted RBP10.57□□□□□ -0.72
TPM3-217ENST00000504663 ATP8B1O43520 1251 aa10.57□□□□□ -0.72
TPM3-217ENST00000504663 ZNF821O75541 412 aaPredicted RBP10.57□□□□□ -0.72
TPM3-217ENST00000504663 STK10O94804 968 aaKnown RBP10.57□□□□□ -0.72
TPM3-217ENST00000504663 MT-CYBP00156 380 aaPredicted RBP10.57□□□□□ -0.72
TPM3-217ENST00000504663 SHBGP04278 402 aa10.57□□□□□ -0.72
TPM3-217ENST00000504663 APRTP07741 180 aa10.57□□□□□ -0.72
TPM3-217ENST00000504663 NUDT17P0C025 328 aa10.57□□□□□ -0.72
TPM3-217ENST00000504663 CISD3P0C7P0 127 aa10.57□□□□□ -0.72
TPM3-217ENST00000504663 BMP1P13497 986 aa10.57□□□□□ -0.72
TPM3-217ENST00000504663 TNNT3P45378 269 aaPredicted RBP10.57□□□□□ -0.72
TPM3-217ENST00000504663 MMP13P45452 471 aa10.57□□□□□ -0.72
TPM3-217ENST00000504663 OXCT1P55809 520 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms