RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 SLC7A2P52569 658 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 USP10Q14694 798 aaKnown RBP7.74□□□□□ -1.17
NEDD9-208ENST00000504387 MAP1SQ66K74 1059 aaPredicted RBP7.74□□□□□ -1.17
NEDD9-208ENST00000504387 RNF19BQ6ZMZ0 732 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 GADL1Q6ZQY3 521 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 ZNF280CQ8ND82 737 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 DQX1Q8TE96 717 aaKnown RBP7.74□□□□□ -1.17
NEDD9-208ENST00000504387 LZICQ8WZA0 190 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 CCDC90BQ9GZT6 254 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 ATXN3LQ9H3M9 355 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 SIAEQ9HAT2 523 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 SLC38A10Q9HBR0 1119 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 CHRAC1Q9NRG0 131 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 EXD2Q9NVH0 621 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 BCAP29Q9UHQ4 241 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 SORCS3Q9UPU3 1222 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 NHSQ6T4R5 1651 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 CDK5RAP2Q96SN8 1893 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 H3BMQ9 156 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 NFICP08651 508 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 MTHFD1P11586 935 aaKnown RBP7.74□□□□□ -1.17
NEDD9-208ENST00000504387 HMOX2P30519 316 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 SDC4P31431 198 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 RPL14P50914 215 aaKnown RBP7.74□□□□□ -1.17
NEDD9-208ENST00000504387 CLCN3P51790 818 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 CTBP1Q13363 440 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 CCDC14Q49A88 953 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 XKR3Q5GH77 459 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 TBCELQ5QJ74 424 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 CLEC6AQ6EIG7 209 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 HMBOX1Q6NT76 420 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 SLC2A7Q6PXP3 512 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 KCTD8Q6ZWB6 473 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 ACOT1Q86TX2 421 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 GPR180Q86V85 440 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 SIX6OS1Q8N1H7 587 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 ELMO1Q92556 727 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 CASP10Q92851 521 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 CERS2Q96G23 380 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 COG8Q96MW5 612 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 NEURL2Q9BR09 285 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 ACE2Q9BYF1 805 aaPredicted RBP7.74□□□□□ -1.17
NEDD9-208ENST00000504387 ST6GALNAC4Q9H4F1 302 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 CHST12Q9NRB3 414 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 SPATA7Q9P0W8 599 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 TLK1Q9UKI8 766 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 CNOT6Q9ULM6 557 aaKnown RBP7.74□□□□□ -1.17
NEDD9-208ENST00000504387 PCDHB12Q9Y5F1 795 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 PTGDR2Q9Y5Y4 395 aa7.74□□□□□ -1.17
NEDD9-208ENST00000504387 LAMA3Q16787 3333 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 RGL2O15211 777 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 HDAC3O15379 428 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 YWHAQP27348 245 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 ELK4P28324 431 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 PPARGP37231 505 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-208ENST00000504387 ASPAP45381 313 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 STAT5BP51692 787 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 PFKPQ01813 784 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 PRKCQQ04759 706 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 PTPN11Q06124 597 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-208ENST00000504387 RAB39AQ14964 217 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 EEF1DP3Q658K8 133 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 DNAJC14Q6Y2X3 702 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-208ENST00000504387 VSIG10LQ86VR7 867 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 SLC41A1Q8IVJ1 513 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 RYBPQ8N488 228 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-208ENST00000504387 LZTR1Q8N653 840 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 URGCPQ8TCY9 931 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 TAMM41Q96BW9 452 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 ITM2CQ9NQX7 267 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 KLHL8Q9P2G9 620 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-208ENST00000504387 POU2F3Q9UKI9 436 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 TSPAN16Q9UKR8 245 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 MAGED1Q9Y5V3 778 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-208ENST00000504387 PRSS51A0A1B0GVH4 220 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 C9IYK1 514 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 PTGES3LE9PB15 166 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 AP3B1O00203 1094 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 RNF103O00237 685 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 CLOCKO15516 846 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 NOL3O60936 208 aaKnown RBP7.73□□□□□ -1.17
NEDD9-208ENST00000504387 XYLBO75191 536 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 ESRRBO95718 433 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 PRKCBP05771 671 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 TGM2P21980 687 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 COL5A3P25940 1745 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-208ENST00000504387 ADORA2BP29275 332 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 EEF1DP29692 281 aaKnown RBP7.73□□□□□ -1.17
NEDD9-208ENST00000504387 BAG6P46379 1132 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 RAD23AP54725 363 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 GJA9P57773 515 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 STXBP2Q15833 593 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 IMPG1Q17R60 797 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 KIF19Q2TAC6 998 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 GJC2Q5T442 439 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-208ENST00000504387 PMF1Q6P1K2 205 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 LYSMD3Q7Z3D4 306 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 HEATR4Q86WZ0 1026 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 MICALL2Q8IY33 904 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 CCDC185Q8N715 623 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms