RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 FOXF2Q12947 444 aa5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 TBCEQ15813 527 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 CCDC142Q17RM4 750 aa5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 SLC9B1Q4ZJI4 515 aa5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 ZNF667Q5HYK9 610 aa5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 TMEM81Q6P7N7 255 aa5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 ZNF66Q6ZN08 573 aa5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 MOB3CQ70IA8 216 aa5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 TADA2BQ86TJ2 420 aa5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 DPP10Q8N608 796 aa5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 PLD5Q8N7P1 536 aa5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 ANKRD52Q8NB46 1076 aa5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 CMASQ8NFW8 434 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 METTL6Q8TCB7 284 aa5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 BCAS4Q8TDM0 211 aa5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 GDPD5Q8WTR4 605 aa5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 KLHL29Q96CT2 875 aa5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 KLHL15Q96M94 604 aa5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 TIGD1Q96MW7 591 aa5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 LBHD1Q9BQE6 289 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 FRMD8Q9BZ67 464 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 CXorf56Q9H5V9 222 aa5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 ACTR5Q9H9F9 607 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 BLOC1S4Q9NUP1 217 aa5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 TMEM45AQ9NWC5 275 aa5.29□□□□□ -1.56
TRAPPC13-205ENST00000504243 PABPN1LA6NDY0 278 aaKnown RBP5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 PGPEP1LA6NFU8 196 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 F8W810 466 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 ZBED4O75132 1171 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 TACC1O75410 805 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 RBMXL2O75526 392 aaKnown RBP5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 TIPRLO75663 272 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 TMCC1O94876 653 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 DDAH2O95865 285 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 GALTP07902 379 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 EPHA8P29322 1005 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 FMO4P31512 558 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 ABCD1P33897 745 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 EIF5P55010 431 aaKnown RBP5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 ARF3P61204 181 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 RPS13P62277 151 aaKnown RBP5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 MRPS21P82921 87 aaKnown RBP5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 ARF1P84077 181 aaKnown RBP5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 SETQ01105 290 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 GAD2Q05329 585 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 PTP4A2Q12974 167 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 PDE1CQ14123 709 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 VEPH1Q14D04 833 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 GPATCH4Q5T3I0 446 aaKnown RBP5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 VWA5B1Q5TIE3 1220 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 KIAA1614Q5VZ46 1190 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 HMBOX1Q6NT76 420 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 AAGABQ6PD74 315 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 PRSS45Q7RTY3 260 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 GPAT4Q86UL3 456 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 WDR5BQ86VZ2 330 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 GALNT16Q8N428 558 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 ETNPPLQ8TBG4 499 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 DDB2Q92466 427 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 CENPIQ92674 756 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 SDF4Q9BRK5 362 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 CHCHD6Q9BRQ6 235 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 PIMREGQ9BSJ6 248 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 TUBB6Q9BUF5 446 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 HEMGNQ9BXL5 484 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 QTRT1Q9BXR0 403 aaKnown RBP5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 PAPOLBQ9NRJ5 636 aaKnown RBP5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 ADARB2Q9NS39 739 aaKnown RBP5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 MPP6Q9NZW5 540 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 CTNNAL1Q9UBT7 734 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 RAP2CQ9Y3L5 183 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 PCDHGB5Q9Y5G0 923 aa5.28□□□□□ -1.56
TRAPPC13-205ENST00000504243 A0A0A0MQY5 61 aa5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 SMIM35A0A1B0GVV1 85 aa5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 KCNU1A8MYU2 1149 aa5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 PRPF4O43172 522 aaKnown RBP eCLIP5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 RNASEH2AO75792 299 aaKnown RBP5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 NEURL1O76050 574 aa5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 TMEM63AO94886 807 aa5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 LCKP06239 509 aa5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 NFKBIAP25963 317 aa5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 EPHB2P29323 1055 aa5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 ARL3P36405 182 aa5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 ARL1P40616 181 aaPredicted RBP5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 RARSP54136 660 aaKnown RBP5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 ARSFP54793 590 aa5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 TMPRSS3P57727 454 aa5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 YWHAZP63104 245 aaKnown RBP5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 ID2Q02363 134 aa5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 RUNX2Q13950 521 aa5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 SLC45A4Q5BKX6 768 aa5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 TTC39AQ5SRH9 613 aa5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 MEX3CQ5U5Q3 659 aaKnown RBP5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 ISM2Q6H9L7 571 aa5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 MZT2BQ6NZ67 158 aa5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 CLEC4GQ6UXB4 293 aa5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 TMTC3Q6ZXV5 915 aa5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 PCGF5Q86SE9 256 aa5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 FAM160B2Q86V87 743 aa5.27□□□□□ -1.57
TRAPPC13-205ENST00000504243 LURAP1LQ8IV03 231 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms