RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 ATG16L1Q676U5 607 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 SLC25A41Q8N5S1 370 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 FAR1Q8WVX9 515 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 CENPIQ92674 756 aaPredicted RBP6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 TEFMQ96QE5 360 aaKnown RBP6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 HIPK3Q9H422 1215 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 DECR2Q9NUI1 292 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 ZDHHC7Q9NXF8 308 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 PDP2Q9P2J9 529 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 SUFUQ9UMX1 484 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 ICKQ9UPZ9 632 aa6.37□□□□□ -1.39
UBE2D3-217ENST00000504211 TCOF1Q13428 1488 aaKnown RBP6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 MST1RQ04912 1400 aa6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 MYOM3Q5VTT5 1437 aa6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 RRN3P2A6NIE6 340 aa6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 PEX12O00623 359 aa6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 ANP32CO43423 234 aa6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 HBP1O60381 514 aa6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 IFNA2P01563 188 aa6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 CHRNB1P11230 501 aa6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 KLRC2P26717 231 aa6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 HNF1BP35680 557 aa6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 PLCD1P51178 756 aa6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 SH2D4BQ5SQS7 431 aa6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 B4GALNT4Q76KP1 1039 aa6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 FAM185AQ8N0U4 392 aa6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 LSM14AQ8ND56 463 aaKnown RBP6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 SETD9Q8NE22 299 aa6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 ZNF548Q8NEK5 533 aaPredicted RBP6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 ZNF419Q96HQ0 510 aaPredicted RBP6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 ZNF48Q96MX3 618 aaPredicted RBP6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 IFT27Q9BW83 186 aa6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 NPLQ9BXD5 320 aaPredicted RBP6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 TASP1Q9H6P5 420 aa6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 FBXO40Q9UH90 709 aa6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 COG5Q9UP83 839 aa6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 CLDN16Q9Y5I7 305 aa6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 SHROOM2Q13796 1616 aa6.36□□□□□ -1.39
UBE2D3-217ENST00000504211 ZNF521Q96K83 1311 aa6.35□□□□□ -1.39
UBE2D3-217ENST00000504211 MDM4O15151 490 aa6.35□□□□□ -1.39
UBE2D3-217ENST00000504211 TULP3O75386 442 aa6.35□□□□□ -1.39
UBE2D3-217ENST00000504211 WEE2P0C1S8 567 aa6.35□□□□□ -1.39
UBE2D3-217ENST00000504211 GAD2Q05329 585 aa6.35□□□□□ -1.39
UBE2D3-217ENST00000504211 RPE65Q16518 533 aa6.35□□□□□ -1.39
UBE2D3-217ENST00000504211 TBC1D9BQ66K14 1250 aa6.35□□□□□ -1.39
UBE2D3-217ENST00000504211 KDM1BQ8NB78 822 aa6.35□□□□□ -1.39
UBE2D3-217ENST00000504211 VCPIP1Q96JH7 1222 aa6.35□□□□□ -1.39
UBE2D3-217ENST00000504211 MAELQ96JY0 434 aaKnown RBP6.35□□□□□ -1.39
UBE2D3-217ENST00000504211 CLSTN3Q9BQT9 956 aa6.35□□□□□ -1.39
UBE2D3-217ENST00000504211 PHF7Q9BWX1 381 aaPredicted RBP6.35□□□□□ -1.39
UBE2D3-217ENST00000504211 TAOK3Q9H2K8 898 aa6.35□□□□□ -1.39
UBE2D3-217ENST00000504211 TTC12Q9H892 705 aaPredicted RBP6.35□□□□□ -1.39
UBE2D3-217ENST00000504211 MAP6D1Q9H9H5 199 aa6.35□□□□□ -1.39
UBE2D3-217ENST00000504211 GGA3Q9NZ52 723 aa6.35□□□□□ -1.39
UBE2D3-217ENST00000504211 GTF2A1LQ9UNN4 478 aa6.35□□□□□ -1.39
UBE2D3-217ENST00000504211 MIA2Q96PC5 1412 aa6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 RAB3GAP2Q9H2M9 1393 aa6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 ADGBQ8N7X0 1667 aa6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 A0A0A0MQY5 61 aa6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 OR6C68A6NDL8 312 aa6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 GAGE12JA6NER3 117 aa6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 SH2D7A6NKC9 451 aaPredicted RBP6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 HOXC11O43248 304 aaPredicted RBP6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 STRNO43815 780 aa6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 NDUFB8O95169 186 aa6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 POLBP06746 335 aa6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 CNTFP26441 200 aa6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 SKIV2L2P42285 1042 aaKnown RBP6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 TMEM268Q5VZI3 342 aa6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 RETSATQ6NUM9 610 aa6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 WDR5BQ86VZ2 330 aa6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 GPSM1Q86YR5 675 aa6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 HMCESQ96FZ2 354 aa6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 FOXP1Q9H334 677 aaPredicted RBP6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 FZD3Q9NPG1 666 aa6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 GRHL1Q9NZI5 618 aa6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 DHDHQ9UQ10 334 aa6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 ABCA8O94911 1581 aa6.34□□□□□ -1.39
UBE2D3-217ENST00000504211 NUP153P49790 1475 aaKnown RBP6.34□□□□□ -1.4
UBE2D3-217ENST00000504211 SETD1BQ9UPS6 1966 aaKnown RBP6.33□□□□□ -1.4
UBE2D3-217ENST00000504211 IGLV5-39A0A0G2JS06 123 aa6.33□□□□□ -1.4
UBE2D3-217ENST00000504211 TMEM272A0A1B0GTI8 110 aa6.33□□□□□ -1.4
UBE2D3-217ENST00000504211 TMCC1O94876 653 aa6.33□□□□□ -1.4
UBE2D3-217ENST00000504211 KLKB1P03952 638 aa6.33□□□□□ -1.4
UBE2D3-217ENST00000504211 UNGP13051 313 aaPredicted RBP6.33□□□□□ -1.4
UBE2D3-217ENST00000504211 TBXAS1P24557 533 aaPredicted RBP6.33□□□□□ -1.4
UBE2D3-217ENST00000504211 PSMC2P35998 433 aaKnown RBP6.33□□□□□ -1.4
UBE2D3-217ENST00000504211 CLCNKBP51801 687 aa6.33□□□□□ -1.4
UBE2D3-217ENST00000504211 TRPC3Q13507 836 aa6.33□□□□□ -1.4
UBE2D3-217ENST00000504211 SYTL3Q4VX76 610 aa6.33□□□□□ -1.4
UBE2D3-217ENST00000504211 HSP90AB4PQ58FF6 505 aa6.33□□□□□ -1.4
UBE2D3-217ENST00000504211 NAPEPLDQ6IQ20 393 aa6.33□□□□□ -1.4
UBE2D3-217ENST00000504211 HMBOX1Q6NT76 420 aa6.33□□□□□ -1.4
UBE2D3-217ENST00000504211 TRAPPC11Q7Z392 1133 aa6.33□□□□□ -1.4
UBE2D3-217ENST00000504211 TMTC1Q8IUR5 882 aa6.33□□□□□ -1.4
UBE2D3-217ENST00000504211 DPP10Q8N608 796 aa6.33□□□□□ -1.4
UBE2D3-217ENST00000504211 CMASQ8NFW8 434 aaPredicted RBP6.33□□□□□ -1.4
UBE2D3-217ENST00000504211 STAMQ92783 540 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms