RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 STXBP5Q5T5C0 1151 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 IRF2BP2Q7Z5L9 587 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 C12orf56Q8IXR9 622 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 COPS5Q92905 334 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 TPD52L3Q96J77 140 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 NLNQ9BYT8 704 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 TMEM39AQ9NV64 488 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 ATRNO75882 1429 aa16.75■□□□□ 0.27
PCDHA1-203ENST00000504120 PIK3C2AO00443 1686 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 FAM47E-STBD1D6RA91 191 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 CCNB1P14635 433 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 NFKB1P19838 968 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 ATP13A4Q4VNC1 1196 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 TYW3Q6IPR3 259 aaKnown RBP16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 TSPAN18Q96SJ8 248 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 HMX1Q9NP08 348 aaPredicted RBP16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 SEMA4BQ9NPR2 832 aaPredicted RBP16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 NUDT5Q9UKK9 219 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 FAM50BQ9Y247 325 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 INVSQ9Y283 1065 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 TDRKHQ9Y2W6 561 aaKnown RBP16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 CASZ1Q86V15 1759 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 CD86P42081 329 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 MRPS6P82932 125 aaKnown RBP16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 PDK4Q16654 411 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 ALFQ53S48 1182 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 RORBQ92753 470 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 GTF2A1LQ9UNN4 478 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 SMIM22K7EJ46 135 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 LYPLA2O95372 231 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 CATP04040 527 aaKnown RBP16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 NAGLUP54802 743 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 PFKFB4Q16877 469 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 DNAJC14Q6Y2X3 702 aaPredicted RBP16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 MFSD14AQ96MC6 490 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 ZYG11BQ9C0D3 744 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 DNMT3LQ9UJW3 386 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 MAPRE3Q9UPY8 281 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 UNC5CO95185 931 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 ANXA5P08758 320 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 CNPP09543 421 aaKnown RBP16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 FGRP09769 529 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 POLR2EP19388 210 aaKnown RBP16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 TNFSF9P41273 254 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 SETMARQ53H47 684 aaPredicted RBP16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 SLC41A1Q8IVJ1 513 aa16.74■□□□□ 0.27
PCDHA1-203ENST00000504120 SLC15A5A6NIM6 579 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 EPN2O95208 641 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 KCNH1O95259 989 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 CCDC166P0CW27 439 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 C4BPBP20851 252 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 RAB14P61106 215 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 SQLEQ14534 574 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 ZNF621Q6ZSS3 439 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 QRFPRQ96P65 431 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 BBS4Q96RK4 519 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 PAPOLBQ9NRJ5 636 aaKnown RBP16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 TMEM216Q9P0N5 145 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 MED1Q15648 1581 aaPredicted RBP16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 PARNO95453 639 aaKnown RBP16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 ITGB5P18084 799 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 RPL9P32969 192 aaKnown RBP16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 MARCKSL1P49006 195 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 HK2P52789 917 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 HECTD3Q5T447 861 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 NET1Q7Z628 596 aaPredicted RBP16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 OR8H2Q8N162 312 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 C19orf18Q8NEA5 215 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 OR5B17Q8NGF7 314 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 ZSCAN18Q8TBC5 510 aaPredicted RBP16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 DEPDC7Q96QD5 511 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 EBNA1BP2Q99848 306 aaKnown RBP16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 ACSS3Q9H6R3 686 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 ANAPC2Q9UJX6 822 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 PTCH2Q9Y6C5 1203 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 WTIPA6NIX2 430 aaPredicted RBP16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 MAGEA10P43363 369 aaPredicted RBP16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 TRIM71Q2Q1W2 868 aaKnown RBP16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 MLPHQ9BV36 600 aaPredicted RBP16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 GNPTGQ9UJJ9 305 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 A0A087WXM4 84 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 FAM237BA0A1B0GVD1 139 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 KPNA3O00505 521 aaPredicted RBP16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 TGFB1I1O43294 461 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 RECQL5O94762 991 aaPredicted RBP16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 IFNGR2P38484 337 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 INAQ16352 499 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 RAP1GAP2Q684P5 730 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 AFTPHQ6ULP2 937 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 LRRC52Q8N7C0 313 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 RDH11Q8TC12 318 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 SMAD5Q99717 465 aaKnown RBP16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 ZNF446Q9NWS9 450 aa16.73■□□□□ 0.27
PCDHA1-203ENST00000504120 BIRC5O15392 142 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 MTA2O94776 668 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 MLYCDO95822 493 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 CRADDP78560 199 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 EPS8Q12929 822 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 BHLHE22Q8NFJ8 381 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms