RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 ZNF564Q8TBZ8 553 aaPredicted RBP16.2■□□□□ 0.18
PDLIM7-210ENST00000503827 FAM149B1Q96BN6 582 aa16.2■□□□□ 0.18
PDLIM7-210ENST00000503827 ALG14Q96F25 216 aa16.2■□□□□ 0.18
PDLIM7-210ENST00000503827 HSFY1Q96LI6 401 aa16.2■□□□□ 0.18
PDLIM7-210ENST00000503827 FEM1AQ9BSK4 669 aa16.2■□□□□ 0.18
PDLIM7-210ENST00000503827 EPN3Q9H201 632 aa16.2■□□□□ 0.18
PDLIM7-210ENST00000503827 ADNPQ9H2P0 1102 aa16.2■□□□□ 0.18
PDLIM7-210ENST00000503827 SERTAD1Q9UHV2 236 aa16.2■□□□□ 0.18
PDLIM7-210ENST00000503827 PADI4Q9UM07 663 aa16.2■□□□□ 0.18
PDLIM7-210ENST00000503827 PAXBP1Q9Y5B6 917 aa16.2■□□□□ 0.18
PDLIM7-210ENST00000503827 PCDHB11Q9Y5F2 797 aa16.2■□□□□ 0.18
PDLIM7-210ENST00000503827 LRRK2Q5S007 2527 aa16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 ZFC3H1O60293 1989 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 CLEC18AA5D8T8 446 aa16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 M0QYV0 167 aa16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 FPGTO14772 594 aa16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 ANXA6P08133 673 aa16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 PRR29P0C7W0 189 aa16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 ADKP55263 362 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 FOXK1P85037 733 aa16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 CLCA4Q14CN2 919 aa16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 KIAA1161Q6NSJ0 714 aa16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 CLEC18BQ6UXF7 455 aa16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 B3GNT8Q7Z7M8 397 aa16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 VASH2Q86V25 355 aa16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 CLEC18CQ8NCF0 446 aa16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 PPP1R16AQ96I34 528 aa16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 FEM1CQ96JP0 617 aa16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 GFM1Q96RP9 751 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 TRIM62Q9BVG3 475 aa16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 HDAC8Q9BY41 377 aa16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 PISDQ9UG56 409 aa16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 APOBEC3BQ9UH17 382 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 VPS28Q9UK41 221 aa16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 BSNQ9UPA5 3926 aa16.19■□□□□ 0.18
PDLIM7-210ENST00000503827 KCNU1A8MYU2 1149 aa16.18■□□□□ 0.18
PDLIM7-210ENST00000503827 SART1O43290 800 aaKnown RBP16.18■□□□□ 0.18
PDLIM7-210ENST00000503827 HGFP14210 728 aa16.18■□□□□ 0.18
PDLIM7-210ENST00000503827 MCCD1P59942 119 aaPredicted RBP16.18■□□□□ 0.18
PDLIM7-210ENST00000503827 CYP4F2P78329 520 aa16.18■□□□□ 0.18
PDLIM7-210ENST00000503827 CNGA2Q16280 664 aa16.18■□□□□ 0.18
PDLIM7-210ENST00000503827 SKIDA1Q1XH10 827 aa16.18■□□□□ 0.18
PDLIM7-210ENST00000503827 PRRT3Q5FWE3 981 aa16.18■□□□□ 0.18
PDLIM7-210ENST00000503827 SYPL2Q5VXT5 272 aa16.18■□□□□ 0.18
PDLIM7-210ENST00000503827 FAM26EQ8N5C1 309 aa16.18■□□□□ 0.18
PDLIM7-210ENST00000503827 ATP11CQ8NB49 1132 aa16.18■□□□□ 0.18
PDLIM7-210ENST00000503827 OR2A12Q8NGT7 310 aa16.18■□□□□ 0.18
PDLIM7-210ENST00000503827 TFAP2BQ92481 460 aa16.18■□□□□ 0.18
PDLIM7-210ENST00000503827 PAGE5Q96GU1 130 aa16.18■□□□□ 0.18
PDLIM7-210ENST00000503827 TMEM74Q96NL1 305 aa16.18■□□□□ 0.18
PDLIM7-210ENST00000503827 PSMG3-AS1Q96PY0 264 aa16.18■□□□□ 0.18
PDLIM7-210ENST00000503827 PRMT1Q99873 361 aaKnown RBP16.18■□□□□ 0.18
PDLIM7-210ENST00000503827 FUCA2Q9BTY2 467 aa16.18■□□□□ 0.18
PDLIM7-210ENST00000503827 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.18■□□□□ 0.18
PDLIM7-210ENST00000503827 MYO9AB2RTY4 2548 aa16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 LMO7DNF2Z398 122 aa16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 RAD51BO15315 384 aa16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 PAEPP09466 180 aa16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 SRCP12931 536 aa16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 NOS2P35228 1153 aa16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 NEK3P51956 506 aa16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 EIF2B5Q13144 721 aaKnown RBP16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 SGCGQ13326 291 aa16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 C1orf61Q13536 156 aa16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 FGL2Q14314 439 aa16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 STILQ15468 1287 aa16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 IGFBP7Q16270 282 aa16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 BEND5Q7L4P6 421 aa16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 RBFAQ8N0V3 343 aa16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 HTR3CQ8WXA8 447 aa16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 PPP1R13BQ96KQ4 1090 aa16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 TBATAQ96M53 351 aa16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 RPRD1AQ96P16 312 aaPredicted RBP16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 FOXP3Q9BZS1 431 aa16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 IL36AQ9UHA7 158 aa16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 HS3ST2Q9Y278 367 aa16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 OR51B4Q9Y5P0 310 aa16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 UNC79Q9P2D8 2635 aa16.17■□□□□ 0.18
PDLIM7-210ENST00000503827 BLACEA4D250 179 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 ENO4A6NNW6 628 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 D6RAR5 112 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 SPINT1O43278 529 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 GCATO75600 419 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 TRUB2O95900 331 aaKnown RBP16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 TBXAS1P24557 533 aaPredicted RBP16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 CCKBRP32239 447 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 CASRP41180 1078 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 THOP1P52888 689 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 KRT83P78385 493 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 PTK2BQ14289 1009 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 ARSIQ5FYB1 569 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 RESP18Q5W5W9 173 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 TMEM270Q6UE05 265 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 ZSCAN30Q86W11 494 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 ZFAND4Q86XD8 727 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 OR52K2Q8NGK3 314 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 GRIN3AQ8TCU5 1115 aa16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 CCDC47Q96A33 483 aaKnown RBP16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 LENG8Q96PV6 779 aaPredicted RBP16.16■□□□□ 0.18
PDLIM7-210ENST00000503827 SLC13A1Q9BZW2 595 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms