RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 ANKRD62A6NC57 917 aa18.67■□□□□ 0.58
RNF4-204ENST00000503659 DDX3XO00571 662 aaKnown RBP eCLIP18.67■□□□□ 0.582e-8■■■□□ 17.9
RNF4-204ENST00000503659 LATO43561 262 aa18.67■□□□□ 0.58
RNF4-204ENST00000503659 PLRG1O43660 514 aaKnown RBP18.67■□□□□ 0.58
RNF4-204ENST00000503659 SH3BP5O60239 455 aa18.67■□□□□ 0.58
RNF4-204ENST00000503659 CHRNA3P32297 505 aa18.67■□□□□ 0.58
RNF4-204ENST00000503659 FAM193AP78312 1265 aa18.67■□□□□ 0.58
RNF4-204ENST00000503659 PLEKHA7Q6IQ23 1121 aa18.67■□□□□ 0.58
RNF4-204ENST00000503659 RETSATQ6NUM9 610 aa18.67■□□□□ 0.58
RNF4-204ENST00000503659 PPP1R2P3Q6NXS1 205 aa18.67■□□□□ 0.58
RNF4-204ENST00000503659 KDF1Q8NAX2 398 aaPredicted RBP18.67■□□□□ 0.58
RNF4-204ENST00000503659 ARHGEF2Q92974 986 aaKnown RBP18.67■□□□□ 0.58
RNF4-204ENST00000503659 TMEM121BQ9BXQ6 578 aaPredicted RBP18.67■□□□□ 0.58
RNF4-204ENST00000503659 CEP44Q9C0F1 390 aa18.67■□□□□ 0.58
RNF4-204ENST00000503659 RETREG1Q9H6L5 497 aa18.67■□□□□ 0.58
RNF4-204ENST00000503659 FZD10Q9ULW2 581 aa18.67■□□□□ 0.58
RNF4-204ENST00000503659 ANKRD6Q9Y2G4 727 aa18.67■□□□□ 0.58
RNF4-204ENST00000503659 MSRB2Q9Y3D2 182 aa18.67■□□□□ 0.58
RNF4-204ENST00000503659 CHD6Q8TD26 2715 aa18.66■□□□□ 0.58
RNF4-204ENST00000503659 FAM221BA6H8Z2 402 aa18.66■□□□□ 0.58
RNF4-204ENST00000503659 WNT9AO14904 365 aa18.66■□□□□ 0.58
RNF4-204ENST00000503659 WNT1P04628 370 aa18.66■□□□□ 0.58
RNF4-204ENST00000503659 L1CAMP32004 1257 aa18.66■□□□□ 0.58
RNF4-204ENST00000503659 CTSKP43235 329 aa18.66■□□□□ 0.58
RNF4-204ENST00000503659 TAS2R38P59533 333 aa18.66■□□□□ 0.58
RNF4-204ENST00000503659 RACK1P63244 317 aaKnown RBP18.66■□□□□ 0.58
RNF4-204ENST00000503659 ZSCAN23Q3MJ62 389 aa18.66■□□□□ 0.58
RNF4-204ENST00000503659 EFHC2Q5JST6 749 aa18.66■□□□□ 0.58
RNF4-204ENST00000503659 PIP5KL1Q5T9C9 394 aa18.66■□□□□ 0.58
RNF4-204ENST00000503659 SCYL2Q6P3W7 929 aa18.66■□□□□ 0.58
RNF4-204ENST00000503659 DCUN1D2Q6PH85 259 aa18.66■□□□□ 0.58
RNF4-204ENST00000503659 DBX2Q6ZNG2 339 aa18.66■□□□□ 0.58
RNF4-204ENST00000503659 TMC6Q7Z403 805 aa18.66■□□□□ 0.58
RNF4-204ENST00000503659 GLRX5Q86SX6 157 aa18.66■□□□□ 0.58
RNF4-204ENST00000503659 GATA6Q92908 595 aa18.66■□□□□ 0.58
RNF4-204ENST00000503659 ARRDC3Q96B67 414 aa18.66■□□□□ 0.58
RNF4-204ENST00000503659 CCDC114Q96M63 670 aa18.66■□□□□ 0.58
RNF4-204ENST00000503659 KDM4CQ9H3R0 1056 aa18.66■□□□□ 0.58
RNF4-204ENST00000503659 NOL6Q9H6R4 1146 aaKnown RBP18.66■□□□□ 0.58
RNF4-204ENST00000503659 TM7SF3Q9NS93 570 aa18.66■□□□□ 0.58
RNF4-204ENST00000503659 PARVAQ9NVD7 372 aa18.66■□□□□ 0.58
RNF4-204ENST00000503659 TPX2Q9ULW0 747 aaKnown RBP18.66■□□□□ 0.58
RNF4-204ENST00000503659 FCF1Q9Y324 198 aaKnown RBP18.66■□□□□ 0.58
RNF4-204ENST00000503659 CABIN1Q9Y6J0 2220 aa18.66■□□□□ 0.58
RNF4-204ENST00000503659 C1QTNF9BB2RNN3 333 aa18.65■□□□□ 0.58
RNF4-204ENST00000503659 VILLO15195 856 aa18.65■□□□□ 0.58
RNF4-204ENST00000503659 HYAL3O43820 417 aaPredicted RBP18.65■□□□□ 0.58
RNF4-204ENST00000503659 TOP3BO95985 862 aaKnown RBP18.65■□□□□ 0.58
RNF4-204ENST00000503659 C1QTNF9P0C862 333 aa18.65■□□□□ 0.58
RNF4-204ENST00000503659 GZMAP12544 262 aa18.65■□□□□ 0.58
RNF4-204ENST00000503659 SKILP12757 684 aa18.65■□□□□ 0.58
RNF4-204ENST00000503659 SPINK2P20155 84 aa18.65■□□□□ 0.58
RNF4-204ENST00000503659 ETFBP38117 255 aa18.65■□□□□ 0.58
RNF4-204ENST00000503659 TPM4P67936 248 aa18.65■□□□□ 0.58
RNF4-204ENST00000503659 KLHL30Q0D2K2 578 aa18.65■□□□□ 0.58
RNF4-204ENST00000503659 SUZ12Q15022 739 aaKnown RBP18.65■□□□□ 0.58
RNF4-204ENST00000503659 DPY19L3Q6ZPD9 716 aa18.65■□□□□ 0.58
RNF4-204ENST00000503659 RAB44Q7Z6P3 723 aaPredicted RBP18.65■□□□□ 0.58
RNF4-204ENST00000503659 PCDH20Q8N6Y1 951 aaKnown RBP18.65■□□□□ 0.58
RNF4-204ENST00000503659 TMIEQ8NEW7 156 aa18.65■□□□□ 0.58
RNF4-204ENST00000503659 GRIN3AQ8TCU5 1115 aa18.65■□□□□ 0.58
RNF4-204ENST00000503659 TRIM7Q9C029 511 aa18.65■□□□□ 0.58
RNF4-204ENST00000503659 ARHGAP20Q9P2F6 1191 aa18.65■□□□□ 0.58
RNF4-204ENST00000503659 IL36AQ9UHA7 158 aa18.65■□□□□ 0.58
RNF4-204ENST00000503659 FARP1Q9Y4F1 1045 aaPredicted RBP18.65■□□□□ 0.58
RNF4-204ENST00000503659 WASF2Q9Y6W5 498 aa18.65■□□□□ 0.58
RNF4-204ENST00000503659 AKAP13Q12802 2813 aa18.64■□□□□ 0.58
RNF4-204ENST00000503659 TBC1D3DA0A087WVF3 549 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 TBC1D3IA0A087WXS9 549 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 TBC1D3EA0A087X179 549 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 TBC1D3KA0A087X1G2 549 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 CXorf51AA0A1B0GTR3 108 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 A0A1W2PQJ5 194 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 A0A1W2PR77 199 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 TBC1D3FA6NER0 549 aaPredicted RBP18.64■□□□□ 0.57
RNF4-204ENST00000503659 TBC1D3LB9A6J9 549 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 KPNA3O00505 521 aaPredicted RBP18.64■□□□□ 0.57
RNF4-204ENST00000503659 KCNK3O14649 394 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 FLRT2O43155 660 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 RAMP2O60895 175 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 CBFA2T3O75081 653 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 FTLP02792 175 aaPredicted RBP18.64■□□□□ 0.57
RNF4-204ENST00000503659 PRNPP04156 253 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 TBC1D3HP0C7X1 549 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 PTMSP20962 102 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 AIF1P55008 147 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 UBASH3AP57075 661 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 SLC20A2Q08357 652 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 ARSIQ5FYB1 569 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 HGSNATQ68CP4 663 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 TBC1D3GQ6DHY5 549 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 TBC1D3CQ6IPX1 549 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 TRIM69Q86WT6 500 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 TBC1D3Q8IZP1 549 aaPredicted RBP18.64■□□□□ 0.57
RNF4-204ENST00000503659 ARFGAP1Q8N6T3 406 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 RTL3Q8N8U3 475 aaKnown RBP18.64■□□□□ 0.57
RNF4-204ENST00000503659 MAGEH1Q9H213 219 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 PCOLCE2Q9UKZ9 415 aa18.64■□□□□ 0.57
RNF4-204ENST00000503659 APOBEC2Q9Y235 224 aaKnown RBP18.64■□□□□ 0.57
RNF4-204ENST00000503659 TMEM191CA6NGB0 347 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms