RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 DIAPH2O60879 1101 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 OAZ2O95190 189 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 HSPA4LO95757 839 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 AMHP03971 560 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 ENO1P06733 434 aaKnown RBP12.17□□□□□ -0.46
NUP54-202ENST00000502850 TPBGLP0DKB5 382 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 ELF1P32519 619 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 PSEN1P49768 467 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 NDST2P52849 883 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 SLC12A1Q13621 1099 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 ITGA7Q13683 1181 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 TRMT5Q32P41 509 aaKnown RBP12.17□□□□□ -0.46
NUP54-202ENST00000502850 CFAP157Q5JU67 520 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 RINLQ6ZS11 566 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 KIAA0408Q6ZU52 694 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 NET1Q7Z628 596 aaPredicted RBP12.17□□□□□ -0.46
NUP54-202ENST00000502850 CMC1Q7Z7K0 106 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 TTC7BQ86TV6 843 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 LRRTM3Q86VH5 581 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 NUP93Q8N1F7 819 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 OR6Y1Q8NGX8 325 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 SCAMP5Q8TAC9 235 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 ZSCAN18Q8TBC5 510 aaPredicted RBP12.17□□□□□ -0.46
NUP54-202ENST00000502850 HASPINQ8TF76 798 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 FTHL17Q9BXU8 183 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 TRPV6Q9H1D0 765 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 CHRAC1Q9NRG0 131 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 OLA1Q9NTK5 396 aaKnown RBP12.17□□□□□ -0.46
NUP54-202ENST00000502850 TCAF1Q9Y4C2 921 aa12.17□□□□□ -0.46
NUP54-202ENST00000502850 MOXD2PA6NHM9 499 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 SLCO1B7G3V0H7 640 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 MAFKO60675 156 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 SIN3BO75182 1162 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 TOP3BO95985 862 aaKnown RBP12.16□□□□□ -0.46
NUP54-202ENST00000502850 C2P06681 752 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 GNAZP19086 355 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 CRABP2P29373 138 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 PRDX6P30041 224 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 GCKP35557 465 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 TUBP50607 506 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 RENBPP51606 427 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 ALDH18A1P54886 795 aaKnown RBP12.16□□□□□ -0.46
NUP54-202ENST00000502850 MXRA7P84157 204 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 DSC1Q08554 894 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 THOC5Q13769 683 aaKnown RBP12.16□□□□□ -0.46
NUP54-202ENST00000502850 ITGA9Q13797 1035 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 RCN2Q14257 317 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 CCDC6Q16204 474 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 NOMO2Q5JPE7 1267 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 METTL21CQ5VZV1 264 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 CES4AQ5XG92 561 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 KIAA0930Q6ICG6 404 aaPredicted RBP12.16□□□□□ -0.46
NUP54-202ENST00000502850 TLDC1Q6P9B6 456 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 RAPH1Q70E73 1250 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 UBE2Q1Q7Z7E8 422 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 ZC3HC1Q86WB0 502 aaKnown RBP12.16□□□□□ -0.46
NUP54-202ENST00000502850 SCN4BQ8IWT1 228 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 CNTD1Q8N815 330 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 ATP6V0D2Q8N8Y2 350 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 IPMKQ8NFU5 416 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 CALML6Q8TD86 181 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 CASP10Q92851 521 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 CMTM5Q96DZ9 223 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 DEFB118Q96PH6 123 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 FAM193BQ96PV7 902 aaPredicted RBP12.16□□□□□ -0.46
NUP54-202ENST00000502850 PAK6Q9NQU5 681 aaPredicted RBP12.16□□□□□ -0.46
NUP54-202ENST00000502850 VPS45Q9NRW7 570 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 COMMD8Q9NX08 183 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 ARMCX1Q9P291 453 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 BRCA2P51587 3418 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 NUP205Q92621 2012 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 MIA3Q5JRA6 1907 aa12.16□□□□□ -0.46
NUP54-202ENST00000502850 NYNRINQ9P2P1 1898 aaKnown RBP12.15□□□□□ -0.46
NUP54-202ENST00000502850 C2orf71A6NGG8 1288 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 OR6C75A6NL08 312 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 TM7SF2O76062 418 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 RTN3O95197 1032 aaPredicted RBP12.15□□□□□ -0.46
NUP54-202ENST00000502850 MYCNP04198 464 aaPredicted RBP12.15□□□□□ -0.46
NUP54-202ENST00000502850 PRKCGP05129 697 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 PRKAR2AP13861 404 aaKnown RBP12.15□□□□□ -0.46
NUP54-202ENST00000502850 RHOQP17081 205 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 NMBRP28336 390 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 MLLT6P55198 1093 aaPredicted RBP12.15□□□□□ -0.46
NUP54-202ENST00000502850 SMARCB1Q12824 385 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 OLIG2Q13516 323 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 LAMB3Q13751 1172 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 HNRNPDQ14103 355 aaKnown RBP12.15□□□□□ -0.46
NUP54-202ENST00000502850 ACCSLQ4AC99 568 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 SLC39A12Q504Y0 691 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 PPM1JQ5JR12 505 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 LIPMQ5VYY2 423 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 SCD5Q86SK9 330 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 UMODL1-AS1Q8N2C9 162 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 USP33Q8TEY7 942 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 N4BP2L2Q92802 583 aaPredicted RBP12.15□□□□□ -0.46
NUP54-202ENST00000502850 PRR11Q96HE9 360 aaPredicted RBP12.15□□□□□ -0.46
NUP54-202ENST00000502850 GLT1D1Q96MS3 346 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 RANBP9Q96S59 729 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 TMEM209Q96SK2 561 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 AGAP2Q99490 1192 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms