RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 BBC3Q96PG8 261 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P3-201ENST00000502802 MAP7D2Q96T17 732 aa5.64□□□□□ -1.51
HMGB1P3-201ENST00000502802 AP1M1Q9BXS5 423 aa5.64□□□□□ -1.51
HMGB1P3-201ENST00000502802 KAT14Q9H8E8 782 aa5.64□□□□□ -1.51
HMGB1P3-201ENST00000502802 NFKBIL1Q9UBC1 381 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P3-201ENST00000502802 ICKQ9UPZ9 632 aa5.64□□□□□ -1.51
HMGB1P3-201ENST00000502802 CLDN16Q9Y5I7 305 aa5.64□□□□□ -1.51
HMGB1P3-201ENST00000502802 TTC36A6NLP5 189 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 BEST1O76090 585 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 ZNF202O95125 648 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 SERPINC1P01008 464 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 HNRNPCP07910 306 aaKnown RBP eCLIP5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 TTKP33981 857 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 PRAMEP78395 509 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 CALD1Q05682 793 aaKnown RBP5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 ZNF169Q14929 603 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 RPE65Q16518 533 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 LSM12Q3MHD2 195 aaKnown RBP5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 PLEKHS1Q5SXH7 462 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 VWA5B1Q5TIE3 1220 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 TMEM154Q6P9G4 183 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 SARM1Q6SZW1 724 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 TTLL10Q6ZVT0 673 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 GRASPQ7Z6J2 395 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 TFAP2DQ7Z6R9 452 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 C16orf71Q8IYS4 520 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 NEK9Q8TD19 979 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 IP6K1Q92551 441 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 YME1L1Q96TA2 773 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 SCPEP1Q9HB40 452 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 SNTG1Q9NSN8 517 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 ATP8A2Q9NTI2 1148 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 NCKIPSDQ9NZQ3 722 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 NLKQ9UBE8 527 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 FBXO40Q9UH90 709 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 FBXO4Q9UKT5 387 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 INTS6Q9UL03 887 aaKnown RBP5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 MKLN1Q9UL63 735 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 MAFFQ9ULX9 164 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 TNFSF13BQ9Y275 285 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 CAPN7Q9Y6W3 813 aa5.63□□□□□ -1.51
HMGB1P3-201ENST00000502802 A0A1W2PRQ8 180 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 FRMD3A2A2Y4 597 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 LRRC53A6NM62 1247 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 EIF3CLB5ME19 914 aaKnown RBP5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 JTBO76095 146 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 PGM3O95394 542 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 ADRB2P07550 413 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 NR2F1P10589 423 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 POU1F1P28069 291 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 NNMTP40261 264 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 GARSP41250 739 aaKnown RBP5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 SOX2P48431 317 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 AIMP2Q13155 320 aaKnown RBP5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 TAF11Q15544 211 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 DPCR1Q3MIW9 517 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 PLK5Q496M5 336 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 C5orf22Q49AR2 442 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 AWAT1Q58HT5 328 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 SPECC1Q5M775 1068 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 SERTAD4-AS1Q5TG53 156 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 FAM171A1Q5VUB5 890 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 TMEM268Q5VZI3 342 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 ARMC3Q5W041 872 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 SLC30A6Q6NXT4 461 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 MOB3CQ70IA8 216 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 PRPF39Q86UA1 669 aaKnown RBP5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 ADGRF2Q8IZF7 708 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 FAM47BQ8NA70 645 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 ZFPM2Q8WW38 1151 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 CMTM3Q96MX0 182 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 TEFMQ96QE5 360 aaKnown RBP5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 FRG2BQ96QU4 278 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 IFT27Q9BW83 186 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 STRA6Q9BX79 667 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 MAK16Q9BXY0 300 aaKnown RBP5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 TXLNGYQ9BZA5 131 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 SH2D4AQ9H788 454 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 FBRSL1Q9HCM7 1045 aaKnown RBP5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 A4GNTQ9UNA3 340 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 ADAM18Q9Y3Q7 739 aa5.62□□□□□ -1.51
HMGB1P3-201ENST00000502802 TARSL2A2RTX5 802 aaKnown RBP5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 POC1B-GALNT4F8VUJ3 575 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 UBE2Q2LH0YL09 131 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 RRHO14718 337 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 LIASO43766 372 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 PAGE4O60829 102 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 ERAL1O75616 437 aaKnown RBP5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 SEC31AO94979 1220 aaKnown RBP5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 IL1AP01583 271 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 MAKP20794 623 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 IL11P20809 199 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 GCH1P30793 250 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 RARRES1P49788 294 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 CYP2J2P51589 502 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 EFNA5P52803 228 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 YWHAZP63104 245 aaKnown RBP5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 TSTD2Q5T7W7 516 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 ANKRD23Q86SG2 305 aa5.61□□□□□ -1.51
HMGB1P3-201ENST00000502802 VRK3Q8IV63 474 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms