RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 LONRF2Q1L5Z9 754 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 BMT2Q1RMZ1 405 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 FAM214AQ32MH5 1076 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ZNF718Q3SXZ3 478 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 PTPN20Q4JDL3 420 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 TRMT12Q53H54 448 aaKnown RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 TM4SF20Q53R12 229 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 RUNDC3AQ59EK9 446 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 PERM1Q5SV97 790 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 FAM171A1Q5VUB5 890 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 SDE2Q6IQ49 451 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 SLC25A25Q6KCM7 469 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 CCDC62Q6P9F0 684 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 HDXQ7Z353 690 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 TTC30AQ86WT1 665 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 C1orf210Q8IVY1 113 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 CCDC170Q8IYT3 715 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 LILRA2Q8N149 483 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 DHRSXQ8N5I4 330 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 TMEM104Q8NE00 496 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 PDZD8Q8NEN9 1154 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 MAGEE2Q8TD90 523 aaPredicted RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 AURKBQ96GD4 344 aaPredicted RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 NSMCE3Q96MG7 304 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 GAL3ST1Q99999 423 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 SENP7Q9BQF6 1050 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 SLC25A23Q9BV35 468 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 SCAND2PQ9GZW5 306 aaPredicted RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 OSBPL5Q9H0X9 879 aaPredicted RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 OR10A2Q9H208 303 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ELP3Q9H9T3 547 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 CRLF2Q9HC73 371 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 AGO4Q9HCK5 861 aaKnown RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 GPN1Q9HCN4 374 aaPredicted RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 UBA2Q9UBT2 640 aaPredicted RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 POLLQ9UGP5 575 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 SEC63Q9UGP8 760 aaKnown RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 SLC27A6Q9Y2P4 619 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 MTORP42345 2549 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 RAB3GAP2Q9H2M9 1393 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 SERPINE3A8MV23 424 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 SCDO00767 359 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 EEF1E1O43324 174 aaKnown RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 CTSVO60911 334 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ATP6V1G2O95670 118 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 CPP00450 1065 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 IGHA2P01877 340 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 NFICP08651 508 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 INHBBP09529 407 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 PABPC4LP0CB38 370 aaKnown RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 ZNF8P17098 575 aaPredicted RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 TAL1P17542 331 aaPredicted RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 ITPKBP27987 946 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 AGTR1P30556 359 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 LIG3P49916 1009 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 GPM6AP51674 278 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 STX17P56962 302 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 GJA9P57773 515 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 DAB2P98082 770 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 TYRO3Q06418 890 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 IFIT5Q13325 482 aaKnown RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 PWP1Q13610 501 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 CUL3Q13618 768 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 TMEM132DQ14C87 1099 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 MTHFSDQ2M296 383 aaKnown RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 TMEM44Q2T9K0 475 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ZNF750Q32MQ0 723 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 PRSS36Q5K4E3 855 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ASPHD1Q5U4P2 390 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 PMF1Q6P1K2 205 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 BHLHB9Q6PI77 547 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ZNF852Q6ZMS4 543 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 FCHSD1Q86WN1 690 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ZNF354CQ86Y25 554 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 FBXW8Q8N3Y1 598 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 IL17RCQ8NAC3 791 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 MINDY2Q8NBR6 621 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 TXNDC5Q8NBS9 432 aaKnown RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 WDR60Q8WVS4 1066 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 CNOT9Q92600 299 aaKnown RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 EDEM1Q92611 657 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 FCGR1BQ92637 280 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 STMN2Q93045 179 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 NKD1Q969G9 470 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ZBED3Q96IU2 234 aaPredicted RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 INPP4AQ96PE3 977 aaPredicted RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 CPPED1Q9BRF8 314 aaPredicted RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 NUDT9Q9BW91 350 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 EDA2RQ9HAV5 297 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 MOV10Q9HCE1 1003 aaKnown RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 FZD3Q9NPG1 666 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 THSD1Q9NS62 852 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 THAP1Q9NVV9 213 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 TREM2Q9NZC2 230 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 SH3BGRL2Q9UJC5 107 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 VANGL2Q9ULK5 521 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 PPM1HQ9ULR3 514 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 SNX7Q9UNH6 387 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ERVW-1Q9UQF0 538 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 GIT1Q9Y2X7 761 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms