RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 ARSAP15289 507 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 RXRAP19793 462 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 PAPOLAP51003 745 aaKnown RBP3.12□□□□□ -1.91
RIF1-212ENST00000498041 KRTAP10-7P60409 375 aaPredicted RBP3.12□□□□□ -1.91
RIF1-212ENST00000498041 CTXN3Q4LDR2 81 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 CBWD5Q5RIA9 395 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 DAB2IPQ5VWQ8 1189 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 NUGGCQ68CJ6 796 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 LDHAL6AQ6ZMR3 332 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 GPSM1Q86YR5 675 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 HERC6Q8IVU3 1022 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 BRSK2Q8IWQ3 736 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 SUGP1Q8IWZ8 645 aaKnown RBP3.12□□□□□ -1.91
RIF1-212ENST00000498041 DPP10Q8N608 796 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 ANKRD42Q8N9B4 389 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 LINS1Q8NG48 757 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 RILPL2Q969X0 211 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 RBM17Q96I25 401 aaKnown RBP3.12□□□□□ -1.91
RIF1-212ENST00000498041 PPP1R10Q96QC0 940 aaKnown RBP3.12□□□□□ -1.91
RIF1-212ENST00000498041 FRG2BQ96QU4 278 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 HERC2P3Q9BVR0 1158 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 IFT27Q9BW83 186 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 MAP6D1Q9H9H5 199 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 NOD2Q9HC29 1040 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 PNRC2Q9NPJ4 139 aaKnown RBP3.12□□□□□ -1.91
RIF1-212ENST00000498041 RASSF1Q9NS23 344 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 TBC1D14Q9P2M4 693 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 RRP7AQ9Y3A4 280 aaKnown RBP3.12□□□□□ -1.91
RIF1-212ENST00000498041 MAP3K1Q13233 1512 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 PZPP20742 1482 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 TCOF1Q13428 1488 aaKnown RBP3.11□□□□□ -1.91
RIF1-212ENST00000498041 CCDC18Q5T9S5 1454 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 PLEKHH2Q8IVE3 1493 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 EHBP1L1Q8N3D4 1523 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 SYCP2Q9BX26 1530 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.11□□□□□ -1.91
RIF1-212ENST00000498041 STX16-NPEPL1H3BU86 382 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 STX16O14662 325 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 NTN1O95631 604 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 PRKCHP24723 683 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 SKIV2L2P42285 1042 aaKnown RBP3.11□□□□□ -1.91
RIF1-212ENST00000498041 MVDP53602 400 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 ARHGAP8P85298 464 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 PPATQ06203 517 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 GOLGA8FQ08AF8 430 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 PPFIA1Q13136 1202 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 EFR3AQ14156 821 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 FBXO47Q5MNV8 452 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 Q5PR19 223 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 TMEM268Q5VZI3 342 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 DENND1BQ6P3S1 775 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 PARM1Q6UWI2 310 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 C2CD5Q86YS7 1000 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 CAMK1DQ8IU85 385 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 FAM217AQ8IXS0 508 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 ANKRD44Q8N8A2 993 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 KDM1BQ8NB78 822 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 CMASQ8NFW8 434 aaPredicted RBP3.11□□□□□ -1.91
RIF1-212ENST00000498041 CEP70Q8NHQ1 597 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 FAR1Q8WVX9 515 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 NCSTNQ92542 709 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 MASTLQ96GX5 879 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 ISCUQ9H1K1 167 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 ACAD9Q9H845 621 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 ZDHHC7Q9NXF8 308 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 UPB1Q9UBR1 384 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 DHDHQ9UQ10 334 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 OSGIN2Q9Y236 505 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 PCDHGB3Q9Y5G1 929 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 UGGT1Q9NYU2 1555 aa3.11□□□□□ -1.91
RIF1-212ENST00000498041 DNMT1P26358 1616 aaKnown RBP3.11□□□□□ -1.91
RIF1-212ENST00000498041 PPRC1Q5VV67 1664 aaKnown RBP3.11□□□□□ -1.91
RIF1-212ENST00000498041 MST1RQ04912 1400 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 KIF13AQ9H1H9 1805 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 H0YGN5 161 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 INSIG1O15503 277 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 STRNO43815 780 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 TMCC1O94876 653 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 DDAH2O95865 285 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 CNPP09543 421 aaKnown RBP3.1□□□□□ -1.91
RIF1-212ENST00000498041 SNHG28P0DPA3 235 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 TNFSF8P32971 234 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 GJC1P36383 396 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 RASSF2P50749 326 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 FOXG1P55316 489 aaPredicted RBP3.1□□□□□ -1.91
RIF1-212ENST00000498041 P2RX3P56373 397 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 LINC00205P59089 165 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 DDX10Q13206 875 aaKnown RBP3.1□□□□□ -1.91
RIF1-212ENST00000498041 BYSLQ13895 437 aaKnown RBP3.1□□□□□ -1.91
RIF1-212ENST00000498041 ANKRD1Q15327 319 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 WASHC2DQ5SRD0 308 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 LVRNQ6Q4G3 990 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 SLC16A12Q6ZSM3 486 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 ANKRD18AQ8IVF6 992 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 SCAIQ8N9R8 606 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 C9orf106Q8NAJ2 232 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 USP38Q8NB14 1042 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 HDAC7Q8WUI4 952 aa3.1□□□□□ -1.91
RIF1-212ENST00000498041 INPP5DQ92835 1189 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms