RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 SLC20A2Q08357 652 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 DPYSQ14117 519 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 POLD3Q15054 466 aaPredicted RBP11.48□□□□□ -0.57
ERCC8-208ENST00000497892 SPA17Q15506 151 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 DLG2Q15700 870 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 HADHQ16836 314 aaKnown RBP11.48□□□□□ -0.57
ERCC8-208ENST00000497892 TTC31Q49AM3 519 aaPredicted RBP11.48□□□□□ -0.57
ERCC8-208ENST00000497892 ACCSLQ4AC99 568 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 C22orf39Q6P5X5 142 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 SLC36A4Q6YBV0 504 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 Q6ZVU0 165 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 CPNE8Q86YQ8 564 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 TMEM139Q8IV31 216 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 ATP11CQ8NB49 1132 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 SPC24Q8NBT2 197 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 FAM71BQ8TC56 605 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 TSC1Q92574 1164 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 HSPH1Q92598 858 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 FAM129BQ96TA1 746 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 CEP44Q9C0F1 390 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 LRRC19Q9H756 370 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 PCDH18Q9HCL0 1135 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 LUC7LQ9NQ29 371 aaKnown RBP11.48□□□□□ -0.57
ERCC8-208ENST00000497892 CWC15Q9P013 229 aaKnown RBP11.48□□□□□ -0.57
ERCC8-208ENST00000497892 GMEB2Q9UKD1 530 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 SCML1Q9UN30 329 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 EPN1Q9Y6I3 576 aaPredicted RBP11.48□□□□□ -0.57
ERCC8-208ENST00000497892 RALGAPA1Q6GYQ0 2036 aa11.48□□□□□ -0.57
ERCC8-208ENST00000497892 ZSCAN5CA6NGD5 496 aaPredicted RBP11.47□□□□□ -0.57
ERCC8-208ENST00000497892 TMEM110-MUSTN1A8MSY1 372 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 RASA4BC9J798 803 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 DAPK3O43293 454 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 RASA4O43374 803 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 KDELR3O43731 214 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 RNASEH1O60930 286 aaKnown RBP11.47□□□□□ -0.57
ERCC8-208ENST00000497892 IPO7O95373 1038 aaKnown RBP11.47□□□□□ -0.57
ERCC8-208ENST00000497892 CD160O95971 181 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 DNTTP04053 509 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 KRT7P08729 469 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 ERCC2P18074 760 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 CD6P30203 668 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 OXTRP30559 389 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 ARL4AP40617 200 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 ARHGAP25P42331 645 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 SSR1P43307 286 aaKnown RBP11.47□□□□□ -0.57
ERCC8-208ENST00000497892 NDST2P52849 883 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 TAS2R40P59535 323 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 RPL6Q02878 288 aaKnown RBP11.47□□□□□ -0.57
ERCC8-208ENST00000497892 MESDQ14696 234 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 CST6Q15828 149 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 SPDYCQ5MJ68 293 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 AFMIDQ63HM1 303 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 RAD9BQ6WBX8 426 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 LPCAT2Q7L5N7 544 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 POLNQ7Z5Q5 900 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 DSG4Q86SJ6 1040 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 STK40Q8N2I9 435 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 NPWQ8N729 165 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 OR2A12Q8NGT7 310 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 OR8D1Q8WZ84 308 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 HMCESQ96FZ2 354 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 CCDC114Q96M63 670 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 CSPG4P5Q96PW8 444 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 BAG1Q99933 345 aaPredicted RBP11.47□□□□□ -0.57
ERCC8-208ENST00000497892 USB1Q9BQ65 265 aaKnown RBP11.47□□□□□ -0.57
ERCC8-208ENST00000497892 HINFPQ9BQA5 517 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 KLC2Q9H0B6 622 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 PABPC3Q9H361 631 aaKnown RBP11.47□□□□□ -0.57
ERCC8-208ENST00000497892 TOR4AQ9NXH8 423 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 RCOR3Q9P2K3 495 aaPredicted RBP11.47□□□□□ -0.57
ERCC8-208ENST00000497892 HPCAL4Q9UM19 191 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 PCDHGA5Q9Y5G8 931 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 PCDHA13Q9Y5I0 950 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 NUMA1Q14980 2115 aa11.47□□□□□ -0.57
ERCC8-208ENST00000497892 CFAP54Q96N23 3096 aa11.46□□□□□ -0.57
ERCC8-208ENST00000497892 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.46□□□□□ -0.57
ERCC8-208ENST00000497892 A0A0A6YYK5 440 aaPredicted RBP11.46□□□□□ -0.57
ERCC8-208ENST00000497892 GOLGA6L6A8MZA4 724 aa11.46□□□□□ -0.57
ERCC8-208ENST00000497892 MCF2LO15068 1137 aa11.46□□□□□ -0.57
ERCC8-208ENST00000497892 LRP3O75074 770 aa11.46□□□□□ -0.57
ERCC8-208ENST00000497892 ZNF821O75541 412 aaPredicted RBP11.46□□□□□ -0.57
ERCC8-208ENST00000497892 C5AR1P21730 350 aa11.46□□□□□ -0.57
ERCC8-208ENST00000497892 PTGER3P43115 390 aa11.46□□□□□ -0.57
ERCC8-208ENST00000497892 PSMD8P48556 350 aa11.46□□□□□ -0.57
ERCC8-208ENST00000497892 ARSEP51690 589 aa11.46□□□□□ -0.57
ERCC8-208ENST00000497892 CDH6P55285 790 aa11.46□□□□□ -0.57
ERCC8-208ENST00000497892 SERINC3Q13530 473 aa11.46□□□□□ -0.57
ERCC8-208ENST00000497892 KRT81Q14533 505 aa11.46□□□□□ -0.57
ERCC8-208ENST00000497892 USP30Q70CQ3 517 aa11.46□□□□□ -0.57
ERCC8-208ENST00000497892 MMAAQ8IVH4 418 aaKnown RBP11.46□□□□□ -0.57
ERCC8-208ENST00000497892 ARHGAP12Q8IWW6 846 aa11.46□□□□□ -0.57
ERCC8-208ENST00000497892 TMEFF1Q8IYR6 380 aa11.46□□□□□ -0.57
ERCC8-208ENST00000497892 DCLK2Q8N568 766 aa11.46□□□□□ -0.57
ERCC8-208ENST00000497892 PCDH20Q8N6Y1 951 aaKnown RBP11.46□□□□□ -0.57
ERCC8-208ENST00000497892 ISG20Q96AZ6 181 aaKnown RBP11.46□□□□□ -0.57
ERCC8-208ENST00000497892 TOE1Q96GM8 510 aaKnown RBP11.46□□□□□ -0.57
ERCC8-208ENST00000497892 PDFQ9HBH1 243 aa11.46□□□□□ -0.57
ERCC8-208ENST00000497892 WSB2Q9NYS7 404 aaPredicted RBP11.46□□□□□ -0.57
ERCC8-208ENST00000497892 PPM1HQ9ULR3 514 aa11.46□□□□□ -0.57
ERCC8-208ENST00000497892 FZD4Q9ULV1 537 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms