RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	SYCE1L	A8MT33	242 aa		10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	AURKA	O14965	403 aa		10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	BAIAP3	O94812	1187 aa		10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	TRUB2	O95900	331 aa	Known RBP	10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	NCK1	P16333	377 aa		10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	ALDH3B2	P48448	385 aa		10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	ATXN1	P54253	815 aa	Known RBP	10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	PRKAA2	P54646	552 aa		10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SLC12A2	P55011	1212 aa		10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	JAG1	P78504	1218 aa		10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SLC25A11	Q02978	314 aa	Known RBP	10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	NFATC3	Q12968	1075 aa		10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	CYP51A1	Q16850	503 aa		10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	BORA	Q6PGQ7	559 aa		10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	EPGN	Q6UW88	154 aa		10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	VASH1	Q7L8A9	365 aa	Predicted RBP	10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	TTC30A	Q86WT1	665 aa		10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	GATAD2A	Q86YP4	633 aa		10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	TNIP2	Q8NFZ5	429 aa		10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	PEBP4	Q96S96	227 aa		10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	RIT2	Q99578	217 aa		10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SEPT3	Q9UH03	358 aa		10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	PCDHGC3	Q9UN70	934 aa		10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	PCDHA11	Q9Y5I1	949 aa		10.78	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	PRSS51	A0A1B0GVH4	220 aa		10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597		H0Y858	1186 aa		10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	C4BPA	P04003	597 aa	Known RBP	10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	ERBB2	P04626	1255 aa		10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SPR	P35270	261 aa	Predicted RBP	10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	COPZ1	P61923	177 aa		10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	YWHAE	P62258	255 aa	Known RBP	10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	ANKRD26P1	Q6NSI1	321 aa		10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SLCO6A1	Q86UG4	719 aa		10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	FAM35A	Q86V20	835 aa		10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	C12orf56	Q8IXR9	622 aa		10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	DDIAS	Q8IXT1	998 aa		10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	COLGALT1	Q8NBJ5	622 aa		10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SHCBP1	Q8NEM2	672 aa		10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SLC45A3	Q96JT2	553 aa		10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SIGLEC10	Q96LC7	697 aa		10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	GLT1D1	Q96MS3	346 aa		10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	RNF157	Q96PX1	679 aa		10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	ACO2	Q99798	780 aa	Known RBP	10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	NIF3L1	Q9GZT8	377 aa		10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	PLEKHA5	Q9HAU0	1116 aa		10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	CCNL1	Q9UK58	526 aa	Predicted RBP	10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SNX5	Q9Y5X3	404 aa		10.77	□□□□□ -0.68
TRAPPC12-223	ENST00000497597		A8MV72	311 aa	Predicted RBP	10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	DAB1	O75553	588 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	KRT8	P05787	483 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	ATP5B	P06576	529 aa	Known RBP	10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	ENO2	P09104	434 aa	Predicted RBP	10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	GPD1	P21695	349 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	CES1	P23141	567 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	FAS	P25445	335 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	SDC4	P31431	198 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	GP5	P40197	560 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	NUMB	P49757	651 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	MERTK	Q12866	999 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	MOG	Q16653	247 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	CADM3	Q8N126	398 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	OR52K1	Q8NGK4	314 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	FNIP1	Q8TF40	1166 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	SDCCAG3	Q96C92	435 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	CHST12	Q9NRB3	414 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	MFHAS1	Q9Y4C4	1052 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	COL14A1	Q05707	1796 aa	Known RBP	10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	PRORSD1P	A6NEY8	169 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	NADK	O95544	446 aa	Predicted RBP	10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	MTHFD1	P11586	935 aa	Known RBP	10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	IDO1	P14902	403 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	TGM2	P21980	687 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	PRKCH	P24723	683 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	L1CAM	P32004	1257 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	NEK2	P51955	445 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	TAP1	Q03518	808 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	RWDD4	Q6NW29	188 aa	Known RBP	10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	CRTC3	Q6UUV7	619 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	ABRAXAS1	Q6UWZ7	409 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	PIGZ	Q86VD9	579 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	SLC22A16	Q86VW1	577 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	CAMK1D	Q8IU85	385 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	CDKL3	Q8IVW4	592 aa	Predicted RBP	10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	PQLC3	Q8N755	202 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	POC5	Q8NA72	575 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	USP33	Q8TEY7	942 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	PIWIL1	Q96J94	861 aa	Known RBP	10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	DHX33	Q9H6R0	707 aa	Known RBP	10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	VTA1	Q9NP79	307 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	COL20A1	Q9P218	1284 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	NARF	Q9UHQ1	456 aa		10.77	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	DEAF1	O75398	565 aa	Predicted RBP	10.76	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	POLB	P06746	335 aa		10.76	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	IL7R	P16871	459 aa		10.76	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	CYP2F1	P24903	491 aa		10.76	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	PSMA4	P25789	261 aa	Known RBP	10.76	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	PSMB4	P28070	264 aa		10.76	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	TM4SF1	P30408	202 aa		10.76	□□□□□ -0.69
TRAPPC12-223	ENST00000497597	RPL26	P61254	145 aa	Known RBP	10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms