RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 VSTM4Q8IW00 320 aa19.07■□□□□ 0.64
RPN1-208ENST00000497415 PLPP6Q8IY26 295 aa19.07■□□□□ 0.64
RPN1-208ENST00000497415 MINDY1Q8N5J2 469 aa19.07■□□□□ 0.64
RPN1-208ENST00000497415 PCDH20Q8N6Y1 951 aaKnown RBP19.07■□□□□ 0.64
RPN1-208ENST00000497415 CHST14Q8NCH0 376 aa19.07■□□□□ 0.64
RPN1-208ENST00000497415 SNX19Q92543 992 aa19.07■□□□□ 0.64
RPN1-208ENST00000497415 ISG20Q96AZ6 181 aaKnown RBP19.07■□□□□ 0.64
RPN1-208ENST00000497415 SNRNP25Q9BV90 132 aaKnown RBP19.07■□□□□ 0.64
RPN1-208ENST00000497415 GTPBP2Q9BX10 602 aaKnown RBP19.07■□□□□ 0.64
RPN1-208ENST00000497415 THAP2Q9H0W7 228 aa19.07■□□□□ 0.64
RPN1-208ENST00000497415 KDM4CQ9H3R0 1056 aa19.07■□□□□ 0.64
RPN1-208ENST00000497415 DNAAF2Q9NVR5 837 aaKnown RBP19.07■□□□□ 0.64
RPN1-208ENST00000497415 GPATCH2LQ9NWQ4 482 aa19.07■□□□□ 0.64
RPN1-208ENST00000497415 TPX2Q9ULW0 747 aaKnown RBP19.07■□□□□ 0.64
RPN1-208ENST00000497415 PLXNA2O75051 1894 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 A0A1W2PPC4 97 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 FAM47DPA6NHR8 397 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 UPK3BL1B0FP48 263 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 UPK3BL2E5RIL1 263 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 FGF10O15520 208 aaPredicted RBP19.06■□□□□ 0.64
RPN1-208ENST00000497415 PLRG1O43660 514 aaKnown RBP19.06■□□□□ 0.64
RPN1-208ENST00000497415 KDELR3O43731 214 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 LRCH4O75427 683 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 GJB3O75712 270 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 PRNPP04156 253 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 PCK1P35558 622 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 GEMIN4P57678 1058 aaKnown RBP19.06■□□□□ 0.64
RPN1-208ENST00000497415 BNC1Q01954 994 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 CNTN1Q12860 1018 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 GRIK2Q13002 908 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 CA9Q16790 459 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 UAP1L1Q3KQV9 507 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 CARD16Q5EG05 197 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 AGBL4Q5VU57 503 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 DPY19L3Q6ZPD9 716 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 UMODL1-AS1Q8N2C9 162 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 OR14C36Q8NHC7 312 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 DNAJC7Q99615 494 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 TNKS2Q9H2K2 1166 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 EBF2Q9HAK2 575 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 TM9SF3Q9HD45 589 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 PCSK1NQ9UHG2 260 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 HPCAL4Q9UM19 191 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 FCF1Q9Y324 198 aaKnown RBP19.06■□□□□ 0.64
RPN1-208ENST00000497415 ACTL7AQ9Y615 435 aa19.06■□□□□ 0.64
RPN1-208ENST00000497415 SPTBN2O15020 2390 aa19.05■□□□□ 0.64
RPN1-208ENST00000497415 ZSCAN5CA6NGD5 496 aaPredicted RBP19.05■□□□□ 0.64
RPN1-208ENST00000497415 PLK4O00444 970 aa19.05■□□□□ 0.64
RPN1-208ENST00000497415 PRPSAP2O60256 369 aa19.05■□□□□ 0.64
RPN1-208ENST00000497415 KCNK5O95279 499 aa19.05■□□□□ 0.64
RPN1-208ENST00000497415 CYP1A2P05177 515 aa19.05■□□□□ 0.64
RPN1-208ENST00000497415 CSRP1P21291 193 aaKnown RBP19.05■□□□□ 0.64
RPN1-208ENST00000497415 RECQLP46063 649 aaPredicted RBP19.05■□□□□ 0.64
RPN1-208ENST00000497415 AFF3P51826 1226 aaKnown RBP19.05■□□□□ 0.64
RPN1-208ENST00000497415 TPI1P60174 286 aa19.05■□□□□ 0.64
RPN1-208ENST00000497415 CCDC122Q5T0U0 273 aa19.05■□□□□ 0.64
RPN1-208ENST00000497415 OR8K1Q8NGG5 319 aa19.05■□□□□ 0.64
RPN1-208ENST00000497415 OR2I1PQ8NGU4 316 aa19.05■□□□□ 0.64
RPN1-208ENST00000497415 DHX35Q9H5Z1 703 aaKnown RBP19.05■□□□□ 0.64
RPN1-208ENST00000497415 DONSONQ9NYP3 566 aa19.05■□□□□ 0.64
RPN1-208ENST00000497415 IL36AQ9UHA7 158 aa19.05■□□□□ 0.64
RPN1-208ENST00000497415 WASF2Q9Y6W5 498 aa19.05■□□□□ 0.64
RPN1-208ENST00000497415 TBC1D3DA0A087WVF3 549 aa19.04■□□□□ 0.64
RPN1-208ENST00000497415 TBC1D3IA0A087WXS9 549 aa19.04■□□□□ 0.64
RPN1-208ENST00000497415 TBC1D3EA0A087X179 549 aa19.04■□□□□ 0.64
RPN1-208ENST00000497415 TBC1D3KA0A087X1G2 549 aa19.04■□□□□ 0.64
RPN1-208ENST00000497415 TBC1D3FA6NER0 549 aaPredicted RBP19.04■□□□□ 0.64
RPN1-208ENST00000497415 TBC1D3LB9A6J9 549 aa19.04■□□□□ 0.64
RPN1-208ENST00000497415 RASA4BC9J798 803 aa19.04■□□□□ 0.64
RPN1-208ENST00000497415 RNF103O00237 685 aa19.04■□□□□ 0.64
RPN1-208ENST00000497415 RASA4O43374 803 aa19.04■□□□□ 0.64
RPN1-208ENST00000497415 LATO43561 262 aa19.04■□□□□ 0.64
RPN1-208ENST00000497415 OPHN1O60890 802 aa19.04■□□□□ 0.64
RPN1-208ENST00000497415 TBC1D3HP0C7X1 549 aa19.04■□□□□ 0.64
RPN1-208ENST00000497415 EIF4A3P38919 411 aaKnown RBP19.04■□□□□ 0.64
RPN1-208ENST00000497415 GRIA4P48058 902 aa19.04■□□□□ 0.64
RPN1-208ENST00000497415 CSNK1EP49674 416 aaKnown RBP19.04■□□□□ 0.64
RPN1-208ENST00000497415 ZNF135P52742 658 aaPredicted RBP19.04■□□□□ 0.64
RPN1-208ENST00000497415 MAPK8IP2Q13387 824 aaPredicted RBP19.04■□□□□ 0.64
RPN1-208ENST00000497415 PIGHQ14442 188 aaPredicted RBP19.04■□□□□ 0.64
RPN1-208ENST00000497415 ASTE1Q2TB18 679 aaPredicted RBP19.04■□□□□ 0.64
RPN1-208ENST00000497415 POM121L1PQ3SYA9 428 aa19.04■□□□□ 0.64
RPN1-208ENST00000497415 PARP15Q460N3 678 aa19.04■□□□□ 0.64
RPN1-208ENST00000497415 PIP5KL1Q5T9C9 394 aa19.04■□□□□ 0.64
RPN1-208ENST00000497415 TBC1D3GQ6DHY5 549 aa19.04■□□□□ 0.64
RPN1-208ENST00000497415 TBC1D3CQ6IPX1 549 aa19.04■□□□□ 0.64
RPN1-208ENST00000497415 TBC1D3Q8IZP1 549 aaPredicted RBP19.04■□□□□ 0.64
RPN1-208ENST00000497415 NIPA2Q8N8Q9 360 aa19.04■□□□□ 0.64
RPN1-208ENST00000497415 ARRDC3Q96B67 414 aa19.04■□□□□ 0.64
RPN1-208ENST00000497415 KCTD15Q96SI1 283 aaPredicted RBP19.04■□□□□ 0.64
RPN1-208ENST00000497415 HEPHQ9BQS7 1158 aa19.04■□□□□ 0.64
RPN1-208ENST00000497415 KLC2Q9H0B6 622 aa19.04■□□□□ 0.64
RPN1-208ENST00000497415 A0A1B0GVT2 93 aa19.03■□□□□ 0.64
RPN1-208ENST00000497415 SSU72P8A0A1W2PR75 194 aa19.03■□□□□ 0.64
RPN1-208ENST00000497415 EEF2KO00418 725 aaKnown RBP19.03■□□□□ 0.64
RPN1-208ENST00000497415 KPNA3O00505 521 aaPredicted RBP19.03■□□□□ 0.64
RPN1-208ENST00000497415 LEFTY1O75610 366 aa19.03■□□□□ 0.64
RPN1-208ENST00000497415 IL1R2P27930 398 aa19.03■□□□□ 0.64
RPN1-208ENST00000497415 HCAR3P49019 387 aa19.03■□□□□ 0.64
RPN1-208ENST00000497415 CCNHP51946 323 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms