RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 MBL2P11226 248 aaPredicted RBP9.2□□□□□ -0.94
HPS4-217ENST00000496385 BMPR1AP36894 532 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 PRKCQQ04759 706 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 TRIM32Q13049 653 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 KCNJ11Q14654 390 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 INAVAQ3KP66 663 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 ZFYVE27Q5T4F4 411 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 ZNF773Q6PK81 442 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 HERC6Q8IVU3 1022 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 CPNE9Q8IYJ1 553 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 THNSL1Q8IYQ7 743 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 PIK3C3Q8NEB9 887 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 FBXL13Q8NEE6 735 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 MAELQ96JY0 434 aaKnown RBP9.2□□□□□ -0.94
HPS4-217ENST00000496385 BTN2A3PQ96KV6 586 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 ACCSQ96QU6 501 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 HSD17B14Q9BPX1 270 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 SLC39A3Q9BRY0 314 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 COG4Q9H9E3 785 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 NEK6Q9HC98 313 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 TCF7L2Q9NQB0 619 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 FBXO8Q9NRD0 319 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 PKD2L1Q9P0L9 805 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 TCRBV7S3A2A0A539 114 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 FAM159BA6NKW6 160 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 PI4K2BG5E9Z4 385 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 FOSP01100 380 aaPredicted RBP9.2□□□□□ -0.94
HPS4-217ENST00000496385 FYNP06241 537 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 PRKCAP17252 672 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 NELFEP18615 380 aaKnown RBP9.2□□□□□ -0.94
HPS4-217ENST00000496385 MX2P20592 715 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 IFNA8P32881 189 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 EIF2B5Q13144 721 aaKnown RBP9.2□□□□□ -0.94
HPS4-217ENST00000496385 PEX6Q13608 980 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 PIGHQ14442 188 aaPredicted RBP9.2□□□□□ -0.94
HPS4-217ENST00000496385 PPP6R3Q5H9R7 873 aaPredicted RBP9.2□□□□□ -0.94
HPS4-217ENST00000496385 CCNYL2Q5T2Q4 361 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 GPATCH4Q5T3I0 446 aaKnown RBP9.2□□□□□ -0.94
HPS4-217ENST00000496385 CHSY3Q70JA7 882 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 UNC5BQ8IZJ1 945 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 SLC43A3Q8NBI5 491 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 SIMC1Q8NDZ2 872 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 ZUFSPQ96AP4 578 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 C9orf16Q9BUW7 83 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 IKZF4Q9H2S9 585 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 DIABLOQ9NR28 239 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 WBP1LQ9NX94 342 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 ENPP5Q9UJA9 477 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 VAV3Q9UKW4 847 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 USTQ9Y2C2 406 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 SNX13Q9Y5W8 968 aa9.2□□□□□ -0.94
HPS4-217ENST00000496385 TESPA1A2RU30 521 aaPredicted RBP9.19□□□□□ -0.94
HPS4-217ENST00000496385 FADS2P1A8MWK0 482 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 C9IYK1 514 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 SLCO1B7G3V0H7 640 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 ITIH1P19827 911 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 S100A5P33763 92 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 GJC1P36383 396 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 P2RX3P56373 397 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 CTAG1AP78358 180 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 PHC1P78364 1004 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 PRAMEP78395 509 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 NME3Q13232 169 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 PCLAFQ15004 111 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 DLG2Q15700 870 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 NFE2Q16621 373 aaPredicted RBP9.19□□□□□ -0.94
HPS4-217ENST00000496385 TAZQ16635 292 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 C15orf59Q2T9L4 293 aaPredicted RBP9.19□□□□□ -0.94
HPS4-217ENST00000496385 LRIT3Q3SXY7 679 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 MTX3Q5HYI7 312 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 ERMP1Q7Z2K6 904 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 C14orf80Q86SX3 495 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 SLC51BQ86UW2 128 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 SIX5Q8N196 739 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 LSMEM1Q8N8F7 131 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 NIPA2Q8N8Q9 360 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 GRPEL2Q8TAA5 225 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 ACTL9Q8TC94 416 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 CPA5Q8WXQ8 436 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 ATG4CQ96DT6 458 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 GLT1D1Q96MS3 346 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 CIB1Q99828 191 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 SEMA6AQ9H2E6 1030 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 ZNF385DQ9H6B1 395 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 TXNRD2Q9NNW7 524 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 SMOXQ9NWM0 555 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 NPAP1Q9NZP6 1156 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 ZC3H7BQ9UGR2 993 aaKnown RBP9.19□□□□□ -0.94
HPS4-217ENST00000496385 EIF3LQ9Y262 564 aaKnown RBP9.19□□□□□ -0.94
HPS4-217ENST00000496385 UGT2A1Q9Y4X1 527 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 PCDHGA3Q9Y5H0 932 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 MN1Q10571 1320 aaPredicted RBP9.19□□□□□ -0.94
HPS4-217ENST00000496385 TMEM191CA6NGB0 347 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 SAC3D1A6NKF1 404 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 PHGDHO43175 533 aaKnown RBP9.19□□□□□ -0.94
HPS4-217ENST00000496385 ICMTO60725 284 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 TMEM191BP0C7N4 346 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 NUDT1P36639 197 aa9.19□□□□□ -0.94
HPS4-217ENST00000496385 RPL10AP62906 217 aaKnown RBP9.19□□□□□ -0.94
HPS4-217ENST00000496385 BASP1P80723 227 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms