RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 SLFN11Q7Z7L1 901 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 GLRX5Q86SX6 157 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 SPON2Q9BUD6 331 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 MAGEH1Q9H213 219 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 DYRK4Q9NR20 520 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 AIPL1Q9NZN9 384 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 DMTF1Q9Y222 760 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 SNX11Q9Y5W9 270 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 DOCK9Q9BZ29 2069 aa16.06■□□□□ 0.16
HDAC4-213ENST00000496347 KPNA3O00505 521 aaPredicted RBP16.05■□□□□ 0.16
HDAC4-213ENST00000496347 YKT6O15498 198 aa16.05■□□□□ 0.16
HDAC4-213ENST00000496347 SMAD6O43541 496 aaKnown RBP16.05■□□□□ 0.16
HDAC4-213ENST00000496347 PCDHGA12O60330 932 aa16.05■□□□□ 0.16
HDAC4-213ENST00000496347 CBFA2T3O75081 653 aa16.05■□□□□ 0.16
HDAC4-213ENST00000496347 SERPINC1P01008 464 aa16.05■□□□□ 0.16
HDAC4-213ENST00000496347 TNFAIP3P21580 790 aa16.05■□□□□ 0.16
HDAC4-213ENST00000496347 GLDCP23378 1020 aa16.05■□□□□ 0.16
HDAC4-213ENST00000496347 HTR7P34969 479 aa16.05■□□□□ 0.16
HDAC4-213ENST00000496347 RPL7AP62424 266 aaKnown RBP16.05■□□□□ 0.16
HDAC4-213ENST00000496347 SUZ12Q15022 739 aaKnown RBP16.05■□□□□ 0.16
HDAC4-213ENST00000496347 SETMARQ53H47 684 aaPredicted RBP16.05■□□□□ 0.16
HDAC4-213ENST00000496347 PIP5KL1Q5T9C9 394 aa16.05■□□□□ 0.16
HDAC4-213ENST00000496347 TMC6Q7Z403 805 aa16.05■□□□□ 0.16
HDAC4-213ENST00000496347 RTL3Q8N8U3 475 aaKnown RBP16.05■□□□□ 0.16
HDAC4-213ENST00000496347 GRIN3AQ8TCU5 1115 aa16.05■□□□□ 0.16
HDAC4-213ENST00000496347 ISG20Q96AZ6 181 aaKnown RBP16.05■□□□□ 0.16
HDAC4-213ENST00000496347 SERAC1Q96JX3 654 aa16.05■□□□□ 0.16
HDAC4-213ENST00000496347 EPAS1Q99814 870 aa16.05■□□□□ 0.16
HDAC4-213ENST00000496347 HDAC8Q9BY41 377 aa16.05■□□□□ 0.16
HDAC4-213ENST00000496347 AASDHPPTQ9NRN7 309 aa16.05■□□□□ 0.16
HDAC4-213ENST00000496347 PARVAQ9NVD7 372 aa16.05■□□□□ 0.16
HDAC4-213ENST00000496347 IL36AQ9UHA7 158 aa16.05■□□□□ 0.16
HDAC4-213ENST00000496347 PCOLCE2Q9UKZ9 415 aa16.05■□□□□ 0.16
HDAC4-213ENST00000496347 HPCAL4Q9UM19 191 aa16.05■□□□□ 0.16
HDAC4-213ENST00000496347 PCDHB9Q9Y5E1 797 aa16.05■□□□□ 0.16
HDAC4-213ENST00000496347 ZZEF1O43149 2961 aa16.05■□□□□ 0.16
HDAC4-213ENST00000496347 TRPM6Q9BX84 2022 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 TBC1D3DA0A087WVF3 549 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 TBC1D3IA0A087WXS9 549 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 TBC1D3EA0A087X179 549 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 TBC1D3KA0A087X1G2 549 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 TBC1D3FA6NER0 549 aaPredicted RBP16.04■□□□□ 0.16
HDAC4-213ENST00000496347 ZSCAN5CA6NGD5 496 aaPredicted RBP16.04■□□□□ 0.16
HDAC4-213ENST00000496347 EIF3CLB5ME19 914 aaKnown RBP16.04■□□□□ 0.16
HDAC4-213ENST00000496347 TBC1D3LB9A6J9 549 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 FAM72CH0Y354 149 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 FGF10O15520 208 aaPredicted RBP16.04■□□□□ 0.16
HDAC4-213ENST00000496347 ZNF821O75541 412 aaPredicted RBP16.04■□□□□ 0.16
HDAC4-213ENST00000496347 TBC1D3HP0C7X1 549 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 GZMAP12544 262 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 ITGB7P26010 798 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 CD38P28907 300 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 OVGP1Q12889 678 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 MAMLD1Q13495 774 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 TRIP6Q15654 476 aaKnown RBP16.04■□□□□ 0.16
HDAC4-213ENST00000496347 POM121L1PQ3SYA9 428 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 FAM72AQ5TYM5 149 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 E4F1Q66K89 784 aaPredicted RBP16.04■□□□□ 0.16
HDAC4-213ENST00000496347 TBC1D3GQ6DHY5 549 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 TBC1D3CQ6IPX1 549 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 PLEKHA7Q6IQ23 1121 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 FAM72DQ6L9T8 149 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 NEK5Q6P3R8 708 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 DBX2Q6ZNG2 339 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 DPY19L3Q6ZPD9 716 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 PRPF39Q86UA1 669 aaKnown RBP16.04■□□□□ 0.16
HDAC4-213ENST00000496347 IQCHQ86VS3 1027 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 FAM72BQ86X60 149 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 TBC1D3Q8IZP1 549 aaPredicted RBP16.04■□□□□ 0.16
HDAC4-213ENST00000496347 BAHD1Q8TBE0 780 aaPredicted RBP16.04■□□□□ 0.16
HDAC4-213ENST00000496347 FNIP1Q8TF40 1166 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 ARHGEF2Q92974 986 aaKnown RBP16.04■□□□□ 0.16
HDAC4-213ENST00000496347 IQCDQ96DY2 449 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 TRIM11Q96F44 468 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 CAMK1GQ96NX5 476 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 EIF3CQ99613 913 aaKnown RBP16.04■□□□□ 0.16
HDAC4-213ENST00000496347 CDC6Q99741 560 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 TNKS2Q9H2K2 1166 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 HAUS4Q9H6D7 363 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 EBF2Q9HAK2 575 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 CBX8Q9HC52 389 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 TAS2R14Q9NYV8 317 aa16.04■□□□□ 0.16
HDAC4-213ENST00000496347 ANKRD11Q6UB99 2663 aaPredicted RBP16.03■□□□□ 0.16
HDAC4-213ENST00000496347 A0A1W2PR77 199 aa16.03■□□□□ 0.16
HDAC4-213ENST00000496347 PLK4O00444 970 aa16.03■□□□□ 0.16
HDAC4-213ENST00000496347 EPHB2P29323 1055 aa16.03■□□□□ 0.16
HDAC4-213ENST00000496347 ACVRL1P37023 503 aa16.03■□□□□ 0.16
HDAC4-213ENST00000496347 GRK6P43250 576 aa16.03■□□□□ 0.16
HDAC4-213ENST00000496347 TAS2R38P59533 333 aa16.03■□□□□ 0.16
HDAC4-213ENST00000496347 KLHL30Q0D2K2 578 aa16.03■□□□□ 0.16
HDAC4-213ENST00000496347 NR1I3Q14994 352 aa16.03■□□□□ 0.16
HDAC4-213ENST00000496347 POLD3Q15054 466 aaPredicted RBP16.03■□□□□ 0.16
HDAC4-213ENST00000496347 KCNT1Q5JUK3 1230 aa16.03■□□□□ 0.16
HDAC4-213ENST00000496347 ERN2Q76MJ5 926 aaKnown RBP16.03■□□□□ 0.16
HDAC4-213ENST00000496347 LUZP1Q86V48 1076 aa16.03■□□□□ 0.16
HDAC4-213ENST00000496347 PLPP6Q8IY26 295 aa16.03■□□□□ 0.16
HDAC4-213ENST00000496347 OXR1Q8N573 874 aa16.03■□□□□ 0.16
HDAC4-213ENST00000496347 CHST14Q8NCH0 376 aa16.03■□□□□ 0.16
HDAC4-213ENST00000496347 SETD7Q8WTS6 366 aaKnown RBP16.03■□□□□ 0.16
HDAC4-213ENST00000496347 NAP1L5Q96NT1 182 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms